Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02103 ATGCGTCTCAATTGCAATGGTTGTCGGGTCCTCCGTAAAGGTTTCATTGCTGATTGCCCCATTCGTCCCTGCCTCCTCTGGCTTCCCTCTCCTCAATCCCCATCCAACGCCACCCTCTTCCTTACCAAGTTCTACGGCCACGCCGGCCTCATCAACCTCCTCAATTCCAGTGCCCCTCACCTTCGACCATCGATTTTTAAGTCCTTGCTCTACCAAGCATGTGGGCAGATTGTGAATCCCATTTTTGGTTCATCTGGCTTACTCTCTTCTGGAAGCTGGCATCTCCGTCAAGCCGACGTGGAAGCTGTACTCAGAGGCGAGCCAATCACGCAGGTTTCGCCTGAATCGACTTTTGACGGTGTTAGCCCGCTCCTGAAGTCGTGTGATATTCGATATGTGGGTAAAAAGGGAAATTCGTGCGCTTCTTATAAGTTCCACAAGGTGAAGAAACCTGAAGCTAGGGCTATCCAGATCCCGCGCCACTGCTTCTTCATTCTCTATCTTGGAATGATGATCAATATCTTCGGTGGTGAAAACTATTAG 543 0.5009 MRLNCNGCRVLRKGFIADCPIRPCLLWLPSPQSPSNATLFLTKFYGHAGLINLLNSSAPHLRPSIFKSLLYQACGQIVNPIFGSSGLLSSGSWHLRQADVEAVLRGEPITQVSPESTFDGVSPLLKSCDIRYVGKKGNSCASYKFHKVKKPEARAIQIPRHCFFILYLGMMINIFGGENY 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02103 180 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 4 146 - -
Accr8g02103 180 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Accr8g02103 180 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02103 Accr-Chr8 44711542 44712197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02103 1 142 AS2 family AT3G02550 57.746 2.27e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr8g02103 LOB 4.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02103 - - pcin:129288305 260.381