Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02085 ATGAATATGACGAATTGCTCTGCCCACCTCGCACAGTACTTCGGCTCCAACTTCACCAACGCCACAGCCGCCGCCGACTTCATCTGCAACAAGTTCACCGACACCACCTTCGCCGTCGATAACACCTTCCTCCTCTTCTCTGCTTACCTTGTGTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGTGCCGGTTCCGTTCGCGCAAAAAACACCATGAATATCATGCTCACCAACGTCCTCGACGCCGCTGCCGGCGGCCTCTTCTACTACCTTTTCGGCTTTGCTTTTGCCTTCGGAGCCCCCTCCAACGTATTCATCGGTCGTCACTCCTTCGGCCTCACTGACTTCCCGTCGAGGGACTTCGATTATAGCTACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATAACCAGCGGCTCCATCGCCGAACGGACTCAATTTGTCGCTTACCTAATCTACTCCTCTTTCCTGACCGGCTTCGTTTATCCTGTTGTGTCTCATTGGATCTGGTCCAGCGACGGTTGGGCTAACGCGGGCCGCTCAGATCCTCTATTCGGATCCGGAGCCATCGATTTCGCCGGGTCGGGTGTGGTCCACATGGTGGGCGGTATTGCTGGTCTGTGGGGTGCACTCATAGAAGGGCCTAGGATTGGCCGGTTTGACCATTCCGGTCAACCGGTCTCGCTTCGCGGGCACAGTGCTACCTTGGTTGTTCTTGGAACTTTCTTGCTCTGGTTCGGGTGGTACGGGTTTAACCCGGGCTCGTTCTTGAAGATTCTGAACAATTACGAGCCGGGAAACTACTACGGGCAGTGGAGCGCGGTGGGCAGAGCCGCCGTGACTACCACTTTAGCCGGCTGCACTGCCGCGATAACAACTCTATTCGGGAAAAGGATTGACTCGGGCCATTGGAACGTGACGGACGTGTGCAATGGGCTGCTCGGCGGATTTGCCGCCATCACGGCGGGATGCTCTGTCGTGGAGCCATGGGCGGCTATCATTTGCGGGTTCATAGCGGCAGTGGTGCTAATTTCATGCAACAAACTTGCGGAGAAGTTGAAGTTTGACGATCCGTTGGAGGCGGCGCAGCTGCACGGCGGTTGCGGCGCATGGGGGCTGATCTTCACGGCGTTGTTCGCGAAGAAGAAGTACGTGAACGAGGTGTACGGAGGGGCGGAGGATCGGGCGTTTGGGTTGTTTATGGGTGGCGGATGGAAGCTATTGGCGGCAAATGTAGTGGAGATTCTGGTGATTATTGGGTGGGTGAGTGTTACAATGGGCCCTCTGTTCTTCATTCTTCACAAGCTTCAACTATTGCGAATCTCGAAGGAAGACGAATTGGAAGGTATGGATCTGACACGACACGGTGGGTTTGCATATGCATACGAGGATTCATCCTTGAGAAATGGGCCGAGACAGTTGGAAATGGAAGGTAAAGCAAATAATGCAGGCGCTCAAACCAGAGAGTAG 1479 0.5531 MNMTNCSAHLAQYFGSNFTNATAAADFICNKFTDTTFAVDNTFLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNVFIGRHSFGLTDFPSRDFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWIWSSDGWANAGRSDPLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGQPVSLRGHSATLVVLGTFLLWFGWYGFNPGSFLKILNNYEPGNYYGQWSAVGRAAVTTTLAGCTAAITTLFGKRIDSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFIAAVVLISCNKLAEKLKFDDPLEAAQLHGGCGAWGLIFTALFAKKKYVNEVYGGAEDRAFGLFMGGGWKLLAANVVEILVIIGWVSVTMGPLFFILHKLQLLRISKEDELEGMDLTRHGGFAYAYEDSSLRNGPRQLEMEGKANNAGAQTRE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02085 492 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Accr8g02085 492 PANTHER AMMONIUM TRANSPORTER 25 459 - -
Accr8g02085 492 FunFam Ammonium transporter 21 476 - -
Accr8g02085 492 Pfam Ammonium Transporter Family 43 463 IPR024041 GO:0008519|GO:0016020|GO:0072488
Accr8g02085 492 Gene3D Ammonium transporter AmtB like domains 15 477 IPR029020 -
Accr8g02085 492 MobiDBLite consensus disorder prediction 472 492 - -
Accr8g02085 492 SUPERFAMILY Ammonium transporter 39 444 - -
Accr8g02085 492 NCBIfam ammonium transporter 40 463 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02085 Accr-Chr8 44483072 44484550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02085 5 478 Inorganic Solute Cotransporters AT4G13510 77.479 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02085 K03320 - qsa:O6P43_022085 771.926