Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02081 ATGCTACTTCTACAACTCATCATCTCATCTTTAATATTGTTGGCTTCTTCTTCTTCTGCAGTTACAGTGTCCATCAATGGCGACGGAGAGTTCACCACAATCTCCCAAGCCATAGCCGCAGCTCCTTCCTACAGCGACACCAAATACACCATCCTCGTCCGACCAGGAATCTACGAGGAACATCTTCAAATCCCCCGCGACAAAACCAACATTCTTCTCATCGGTGACGGTCGCCACAACACCATCCTCCTCGGACACCACAATGGTGGCACCTTGTCTGCAACCGCCACCCTAGCAATTCACGGAGCGGGCTTCATGGCCCAAGGTATGGCCATTGTGAATTCAGCTGGGCCGAATGCAGGCCCTGGAATAGCGCTGCTGAACACGGCGGACATGTCGGTGTTGTACAACTGCTCCGTCGAGGGGTATCAAGACACATTGTGGGCTTCAACGGGCCGTCAATTTTACGGGGAATGCCACATCTACGGCTCCGTCGACTTCGTCATGGGGAATGCCGCCGCCGTTTTCCAAAACTGCATGCTCTACGCCCGCCTCATCTCCGGCTTCTCCGCCTTCACCGCCCAGTCCCGCGACGACCCTCTGCAACGCACCGGTTTTGTTTTCCATTATTGTCGTTTCACGGTGTCTCCGGAGGACGGCGGGAAGAAATTAGCAGTTGGGGACAAGGCTATTTTAGGACGGCCGTGGAGGGCGTATTCGAGGGTGGTGATCATGCGATCGTATATTGATGATATAGTGAGTCCGATGGGGTGGGGAGAGATGAAGGGGACGCCGACCGATCAGGTGACTTACATAGAGTTTGAGAATGAAGGGCCTGGATCGAGTACACGTGGCAGGGTGAGGTGGATTGGTGTGGTGGAGGTGCACGATAAGGAACAGGTGGAGGAGTTCACCGTGTCGCGGTTCATAGAAGGTGATGATTGGATTCCTCCAACTGGGGTTCCATACATTGGAGAATTATAA 984 0.5356 MLLLQLIISSLILLASSSSAVTVSINGDGEFTTISQAIAAAPSYSDTKYTILVRPGIYEEHLQIPRDKTNILLIGDGRHNTILLGHHNGGTLSATATLAIHGAGFMAQGMAIVNSAGPNAGPGIALLNTADMSVLYNCSVEGYQDTLWASTGRQFYGECHIYGSVDFVMGNAAAVFQNCMLYARLISGFSAFTAQSRDDPLQRTGFVFHYCRFTVSPEDGGKKLAVGDKAILGRPWRAYSRVVIMRSYIDDIVSPMGWGEMKGTPTDQVTYIEFENEGPGSSTRGRVRWIGVVEVHDKEQVEEFTVSRFIEGDDWIPPTGVPYIGEL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02081 327 PANTHER PECTINESTERASE 20 317 - -
Accr8g02081 327 FunFam Pectinesterase 4 17 327 - -
Accr8g02081 327 SUPERFAMILY Pectin lyase-like 17 324 IPR011050 -
Accr8g02081 327 Pfam Pectinesterase 21 313 IPR000070 GO:0030599|GO:0042545
Accr8g02081 327 Gene3D - 18 327 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02081 Accr-Chr8 44453493 44454721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02081 18 327 Carbohydrate Esterase AT4G02330 44.201 1.00e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02081 K01051 - gmx:102665195 310.071