Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02063 ATGACTCTGGGTTTACTAGGTGGTGGTGGTGGCGACAATGGTGGCTCTTCTGGGGCTACCCCAAATGAGTCTTCAGTGTCAAATGCTAAGGTTCTGGGTCAAGAATGTTCATCATCGTACAAAGGTGAGGCTGAACTTGAACTGGGTTTGGGTCTGAGCCTTGGTGGTGGTGGTGGTGGGAAGGCCAAGCCTTCTTCTGCATGGGATAGAGTCAGTACTGTGGGTGGCTCTGTTTCTGGCACTAAGAGAGCTGCCGACTCTGTCTCTCATGAAGCTGGATCTCCCACTGCTGGCAGTCAAGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAATAGCTTGATTAACCAAGCAAAGGCTCAGAGAGCTGAAGAAGATAAATCCGGCGGCGACAAGAATAATCCTGATGATGTTTCAGTTACTAAAACGGGCGCTGTCAACAAGACTGAAAAAAACCATCTTGGTTTTGTGAAGGTGAATATGGATGGAGTTCGCATTGGGAGAAAGGTAGATTTGAATTCTCATTCAAGCTATGAGAATTTAGCTCAAACTCTGGAAGACATGTTTTTCATGCCTGCTAAATCAACTGGGTGTGAGAAAGAGCCCGGAATGAAACTCTCTAAGCTTTTGGATGAAACATCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCTGAGGCCAATGGACTTGCTCCTAGATATCAAGAGAAGAATGAGAGGCTAAGGATCAAACCCATTTAG 822 0.4647 MTLGLLGGGGGDNGGSSGATPNESSVSNAKVLGQECSSSYKGEAELELGLGLSLGGGGGGKAKPSSAWDRVSTVGGSVSGTKRAADSVSHEAGSPTAGSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSGGDKNNPDDVSVTKTGAVNKTEKNHLGFVKVNMDGVRIGRKVDLNSHSSYENLAQTLEDMFFMPAKSTGCEKEPGMKLSKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKNERLRIKPI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02063 273 Gene3D - 149 263 - -
Accr8g02063 273 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 45 256 IPR003311 GO:0005634|GO:0006355
Accr8g02063 273 ProSiteProfiles PB1 domain profile. 155 253 IPR000270 GO:0005515
Accr8g02063 273 FunFam Auxin-responsive protein 150 261 - -
Accr8g02063 273 MobiDBLite consensus disorder prediction 15 30 - -
Accr8g02063 273 MobiDBLite consensus disorder prediction 118 146 - -
Accr8g02063 273 MobiDBLite consensus disorder prediction 1 30 - -
Accr8g02063 273 Pfam AUX/IAA family 3 260 IPR033389 -
Accr8g02063 273 SUPERFAMILY CAD & PB1 domains 157 249 - -
Accr8g02063 273 MobiDBLite consensus disorder prediction 70 84 - -
Accr8g02063 273 MobiDBLite consensus disorder prediction 51 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02063 Accr-Chr8 44090591 44092780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02063 158 271 B3 DNA Binding Superfamily AT1G59750 33.043 2.17e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr8g02063 AUX_IAA 9.3e-63 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02063 K14484 - qsa:O6P43_003143 304.679