Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02046 ATGTTGTTCACAATGCTTTTATATCACTTGGTGCAGGATGAAATCTCAAGCCCCATTAGTGCTCGAATTTTCGATCTCTGTGACCACGATTTGTTCCCAGAGAACCTGCAGAATTCTGAGGTTACCTCCAGCTCTAACTGTTGCTATGAAGATAACTCCTCCTATGCCCAAAATATATCTCCTGCTTTAGGTGTAGACAATAAATTCAACACTTGCAATACAATCACCACCCAAACTAGCACAAATCCGGCCAACAGGACCACCGCCCTAGCTGATCCTACTGCCACCATTACCACCAACAACAACAACACAACCAACAGTAGCAATCTGGCCATAGTCTTTGACCCACAAGAAGAAATTGACAATGACATTTCTGCCTCCATAGATTTCTCATCATCTCCTGCTTTTTCTGTCCCTCAATATCTGCCAGTCACAACTCAACAGGATCAGCAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACACTTGCTGCAAGTTCAGTTGTGGATGGCCTTGCACAATACCCACCAGACTCTACTGTTGCACCTCTCATGGGGGCACCATTAGCTTCTGTTTTTGAAGATGATTGCTTAACCTCTGTCCCTTCTTATGTGCCTCTGAACCCTCCATCTCCTTCTTGCTCTTATCTTAGCCCTGGCATGGGACCTTACATGCCTCTTGGTCCCCTTAATACTGCCATGTCTGCTGATGGTTCTGGGATATATGGCAGCACCATTATTCTGGGTTCTGATCTGCAGCCACAAGAACTGGATTACCGGGGAGAAAATGGTGGACTTTTTGGTCCAGATTCAATTCAAAGGGTTTTCAACACTCCAGACCTTCAGGCACTTAGTGCTGAGAATCAGCAACTGATATCTGGGGCTGCAAGTTCCTCCACTTTGACACCAGAAATATCAAACTTGGAGGATAATAGCTACAAGGTTCGGAAACTTTCTGTTGAACAGAGGAAAGAAAAGATTGTTAGATACTTGAAGAAAAGGCAAGAGAGAAACTTCAGCAAGAAAATCAAGTATGCGTGTCGCAAAACTCTAGCGGATAGCCGGCCTCGGGTCAGGGGAAGGTTTGCAAAGAATGATGATTTTGGAGATACTCATAGACCTGCTAGTAGCAATCATGAAGAGGATGATGAAGACGACATAGTTGTGAAGGAAGAAGATGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1269 0.4413 MLFTMLLYHLVQDEISSPISARIFDLCDHDLFPENLQNSEVTSSSNCCYEDNSSYAQNISPALGVDNKFNTCNTITTQTSTNPANRTTALADPTATITTNNNNTTNSSNLAIVFDPQEEIDNDISASIDFSSSPAFSVPQYLPVTTQQDQQFDFSSLQPQVTLAASSVVDGLAQYPPDSTVAPLMGAPLASVFEDDCLTSVPSYVPLNPPSPSCSYLSPGMGPYMPLGPLNTAMSADGSGIYGSTIILGSDLQPQELDYRGENGGLFGPDSIQRVFNTPDLQALSAENQQLISGAASSSTLTPEISNLEDNSYKVRKLSVEQRKEKIVRYLKKRQERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEDDEDDIVVKEEDDDMVDSSDIFAHISGVNSFKCNYSIQSWI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02046 422 MobiDBLite consensus disorder prediction 361 386 - -
Accr8g02046 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 96 382 IPR045281 GO:0009909
Accr8g02046 422 Pfam CCT motif 323 365 IPR010402 GO:0005515
Accr8g02046 422 MobiDBLite consensus disorder prediction 361 380 - -
Accr8g02046 422 ProSiteProfiles CCT domain profile. 323 365 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02046 Accr-Chr8 44007795 44009938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02046 323 381 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 4.77e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr8g02046 CCT 5.3e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02046 - - aprc:113871720 547.354