Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01996 ATGGATCACGTTATTGGCGGAAAATTCAAGCTCGAGCGGAAGATTGGGAGTGGATCGTTTGGCGAGCTTTATTTGGGCGTTAATGTGCAGAATGGAGAGGAAGTAGGTGTCAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTCCAAGGAGGAACTGGTATACCACATTTAAAATGGTTTGGAGTTGAGGGTGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTAGAAGACTTGTTTAACTATTGCAATCGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTAATAAACAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGCCGCAAAGCAAACCAGGTGTACGTAATTGATTATGGCCTTGCAAAAAAGTATCAGGATCTCCAAACACATAAGCACATACCATACAGGGAAAACAAGAATCTAACTGGAACTGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACCCCAATAGAGGTCCTTTGCAAGGCATATCCTTCAGAGTTTACATCTTACTTTCACTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATTCATACCTAAAGAGACTCTTCCGTGACCTATTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGACTGGACTATATTAAAATATCCTCAAATTGGATCAAGTTCCAGATCACGGCAGCCAAGTGGGAAGCAAGTTATAAACCAAGGACCTCCTGCAGAAAGAATAGAAAGGCCTTTAGTGGCACAAGAGCCTCGGGAACGACTTCCAGGTTCGGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTGGTGATCATTCTAGGCACAGATCTTCAGATGGTGCGCCCTCGTCCAAAGTAGTGCACCCTGATTCTGAGAGGGCTCGTAGTTCTTCGCGCACTGGTAGTGCCTCAAAAAGGCCTATTGTGTCAAGCAGCCGACCAAGCTCCTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCAGATTAATGTCGAGTAGTGGCCGTTTATCAACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAACATCAAGAGGTGGCCGTGATGATGCAATAAGGAGCTTTGAGCTTCTGTCAATTGGCGCAGGGAAAAGGAAATGA 1389 0.4312 MDHVIGGKFKLERKIGSGSFGELYLGVNVQNGEEVGVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYQDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKAYPSEFTSYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRQPSGKQVINQGPPAERIERPLVAQEPRERLPGSVEAFARRSGSGLLGDHSRHRSSDGAPSSKVVHPDSERARSSSRTGSASKRPIVSSSRPSSSGEPSESRASRLMSSSGRLSTTQRIQPGFESKSSSFTRATTSRGGRDDAIRSFELLSIGAGKRK 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01996 462 MobiDBLite consensus disorder prediction 299 313 - -
Accr8g01996 462 CDD STKc_CK1_delta_epsilon 8 282 - -
Accr8g01996 462 MobiDBLite consensus disorder prediction 299 462 - -
Accr8g01996 462 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01996 462 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01996 462 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Accr8g01996 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Accr8g01996 462 MobiDBLite consensus disorder prediction 378 440 - -
Accr8g01996 462 FunFam Casein kinase 1-like protein 1 329 - -
Accr8g01996 462 Gene3D Transferase(Phosphotransferase) domain 1 1 329 - -
Accr8g01996 462 MobiDBLite consensus disorder prediction 350 377 - -
Accr8g01996 462 FunFam Putative Casein kinase I 1 85 - -
Accr8g01996 462 PANTHER CASEIN KINASE-RELATED 13 391 - -
Accr8g01996 462 SMART serkin_6 9 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01996 Accr-Chr8 43533937 43538271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01996 15 213 MAP Kinase Kinase Kinase AT3G06030 25.359 9.38e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Accr8g01996 Pkinase 6.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01996 K08960 - mnt:21404312 785.408