Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01995 ATGGTCATGGATCACGTTATTGGCGGAAAATTCAAGCTCGAGCGGAAGATTGGGAGTGGATCGTTTGGCGAGCTTTATTTGGGCGTTAATGTGCAGAATGGAGAGGAAGTAGGTGTCAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTCCAAGGAGGAACTGGTATACCACATTTAAAATGGTTTGGAGTTGAGGGTGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTAGAAGACTTGTTTAACTATTGCAATCGAAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTAATAAACAGAGTTGAATACATGCATTCCCGAGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTTTTAATGGGTTTAGGCCGCAAAGCAAACCAGGTGTACGTAATTGATTATGGCCTTGCAAAAAAGTATCAGGATCTCCAAACACATAAGCACATACCATACAGGGAAAACAAGAATCTAACTGGAACTGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACCCCAATAGAGGTCCTTTGCAAGGCATATCCTTCAGAGTTTACATCTTACTTTCACTACTGCCGATCATTGCGGTTTGATGACAAACCTGATTATTCATACCTAAAGAGACTCTTCCGTGACCTATTTATTAGAGAAGGTTATCAGTTTGATTATGTATTTGACTGGACTATATTAAAATATCCTCAAATTGGATCAAGTTCCAGATCACGGCAGCCAAGTGGGAAGCAAGTTATAAACCAAGGACCTCCTGCAGAAAGAATAGAAAGGCCTTTAGTGGCACAAGAGCCTCGGGAACGACTTCCAGGTTCGGTTGAAGCATTTGCTAGAAGAAGTGGCTCTGGTCTGCTTGGTGATCATTCTAGGCACAGATCTTCAGATGGTGCGCCCTCGTCCAAAGTAGTGCACCCTGATTCTGAGAGGGCTCGTAGTTCTTCGCGCACTGGTAGTGCCTCAAAAAGGCCTATTGTGTCAAGCAGCCGACCAAGCTCCTCTGGTGAGCCTAGTGAAAGCCGTGCTAGCAGATTAATGTCGAGTAGTGGCCGTTTATCAACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTTACCCGTGCTACAACATCAAGAGGTGGCCGTGATGATGCAATAAGGAGCTTTGAGCTTCTGTCAATTGGCGCAGGGAAAAGGAAATGA 1395 0.4315 MVMDHVIGGKFKLERKIGSGSFGELYLGVNVQNGEEVGVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYQDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKAYPSEFTSYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRQPSGKQVINQGPPAERIERPLVAQEPRERLPGSVEAFARRSGSGLLGDHSRHRSSDGAPSSKVVHPDSERARSSSRTGSASKRPIVSSSRPSSSGEPSESRASRLMSSSGRLSTTQRIQPGFESKSSSFTRATTSRGGRDDAIRSFELLSIGAGKRK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01995 464 CDD STKc_CK1_delta_epsilon 10 284 - -
Accr8g01995 464 MobiDBLite consensus disorder prediction 301 464 - -
Accr8g01995 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Accr8g01995 464 SMART serkin_6 11 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01995 464 SUPERFAMILY Protein kinase-like (PK-like) 6 292 IPR011009 -
Accr8g01995 464 MobiDBLite consensus disorder prediction 380 442 - -
Accr8g01995 464 FunFam Casein kinase 1-like protein 3 331 - -
Accr8g01995 464 Pfam Protein kinase domain 12 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01995 464 MobiDBLite consensus disorder prediction 352 379 - -
Accr8g01995 464 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Accr8g01995 464 FunFam Putative Casein kinase I 3 87 - -
Accr8g01995 464 MobiDBLite consensus disorder prediction 301 315 - -
Accr8g01995 464 ProSiteProfiles Protein kinase domain profile. 11 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01995 464 PANTHER CASEIN KINASE-RELATED 11 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01995 Accr-Chr8 43533931 43538271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01995 17 215 MAP Kinase Kinase Kinase AT3G06030 25.359 1.02e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Accr8g01995 Pkinase 6.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01995 K08960 - mnt:21404312 785.408