Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01977 ATGAGCAAGGAGCTGCAACGAGACTTTGACGTATTGTCGGAACTTGAACGCGGCCGATTCGGCACTGTCTATAAGTGCGCCTCCCGGAGCAACGCCGACCATATCTTCGCCGTGAAATCCATCGACAAACTCGTGGTCGGGGCCGGCGACTTTCTTGACGCCCTATGCCTCTCCAACGAGGCCAAGATCGTGCAGCTCCTCAACCCTCACCCCAACATCGTCACCCTCCACAAGGTCTACGAGGACGAAAACCACCTCCACTTGCTCTTCGAACTCTGCGACGACGCCGACTTCCACAGCCGGCTAGCTCAAGGAACTAGCGCCATACCGGAATCAGACGCCTCCCGGATAATGCGTCAGCTTATGCAAGCCGTGTCCCACTGCCACCGCCTCGGCGTGGCTCACCGCGATATCAAGCCGGAGAATATACTTTTCACCGGGCAGCATGGCGGCCGGCTGAAGCTGGCGGACTTCGGGTCGGCTGAGATTTTCAAGGAGGGGGAGCTGATAAGAGGGGTGGTTGGGACGCCGTACTACGTGGCGCCAGAGGTCGTAGCCGGCAGGGAGTACAACGAGAAAGTGGATGTGTGGAGCAGCGGCGTGATATTGTACATGATGTTATCAGGGAATCCTCCGTTCGACGGAGAAACCGAAGTGGAGATATTTGAGGCAGTGCTTAGAGGTAACCTGAGATTTCCGAGACAGTATTTTCAGTCTGTGTCGCGGGAGGCCAAGGATCTGCTCAGAAGAATGATTTGTAAAGACGTTTGCAGAAGGTTTTCGGCTGAGGAAGTTCTGAGTCATCCTTGGTTCAGCATATTTGCTGACAAGACAACGTGA 840 0.5524 MSKELQRDFDVLSELERGRFGTVYKCASRSNADHIFAVKSIDKLVVGAGDFLDALCLSNEAKIVQLLNPHPNIVTLHKVYEDENHLHLLFELCDDADFHSRLAQGTSAIPESDASRIMRQLMQAVSHCHRLGVAHRDIKPENILFTGQHGGRLKLADFGSAEIFKEGELIRGVVGTPYYVAPEVVAGREYNEKVDVWSSGVILYMMLSGNPPFDGETEVEIFEAVLRGNLRFPRQYFQSVSREAKDLLRRMICKDVCRRFSAEEVLSHPWFSIFADKTT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01977 279 Pfam Protein kinase domain 11 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01977 279 SUPERFAMILY Protein kinase-like (PK-like) 5 272 IPR011009 -
Accr8g01977 279 CDD STKc_CAMK 8 270 - -
Accr8g01977 279 FunFam Maternal embryonic leucine zipper kinase 2 277 - -
Accr8g01977 279 SMART serkin_6 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01977 279 ProSiteProfiles Protein kinase domain profile. 9 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01977 279 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Accr8g01977 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Accr8g01977 279 Gene3D Transferase(Phosphotransferase) domain 1 96 278 - -
Accr8g01977 279 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 271 - -
Accr8g01977 279 PIRSF ILK 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01977 Accr-Chr8 43355257 43356210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01977 9 271 EF-hand Containing Proteins AT1G50700 43.609 8.93e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr8g01977 Pkinase 4.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01977 K08794 - qsa:O6P43_021421 358.992