Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01969 ATGGAGGCAGATGGGTCGGGATCTAGTAGGGCCAAGGACGTGGAAGGTGGCAGAGATGTCAGATACAGGGGAGTGAGGCGGCGGCCCTGGGGGAAGTTCGCAGCCGAGATCCGGGACTCGTCCAGGCAGGGCCAGAGGGTGTGGCTGGGGACTTTCAACACGGCGGAGGATGCCGCCAGGGCCTACGACCGAGCTGCTTATGCCATGAGAGGCCCATTTGCTATCCTCAACTTCCCCGATGAATACCCACTCTCCGCCGGCGGTGCTGATGCCATGGCTGAACGTCGTTCCCCGTCGAGCAGTAAAGTGCATGAAAAAGAAGTGTTCGAGTTCGAGTACTTGGATGACAAATTGCTGGAGGAGCTTCTTGATTTTGAAGAGAACAGGAACAAGGGAAATTGA 402 0.5697 MEADGSGSSRAKDVEGGRDVRYRGVRRRPWGKFAAEIRDSSRQGQRVWLGTFNTAEDAARAYDRAAYAMRGPFAILNFPDEYPLSAGGADAMAERRSPSSSKVHEKEVFEFEYLDDKLLEELLDFEENRNKGN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01969 133 SUPERFAMILY DNA-binding domain 21 81 IPR016177 GO:0003677
Accr8g01969 133 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Accr8g01969 133 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Accr8g01969 133 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Accr8g01969 133 PANTHER DNA-BINDING DOMAIN 16 126 IPR044808 GO:0003700|GO:0009873
Accr8g01969 133 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Accr8g01969 133 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Accr8g01969 133 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Accr8g01969 133 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Accr8g01969 133 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01969 Accr-Chr8 43001407 43001808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01969 18 129 AP2-EREBP Transcription Factor Family AT3G23230 57.724 2.30e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01969 AP2 6.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01969 - - gmx:100775830 153.295