Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01966 ATGGATTCGCTTGAAGGTGGGAGTTGCTGGGATTTTCTCGATTTCAGCTTGATCGACGATACACCGCCGGCGCCCACCGATTTTCTTTGGTCCAATCAGAGCGTGAGCTCGGGAACTGACCTTTCATGTGGTGCTGTTGTTCCTCAAGAGAACTCCGGGAAGAGAAGACGCCCCAGTTTATCTGGCAACCCAGGGACAAAAGCTTGTCGTGAAAAAATGCGGAGGGAGAAACTGAATGACAGATTTTGTGACTTGAGCTCTGTTTTGGAGCCTGGGAGACCTGTGAGGACTGACAAGTCAGCTATACTTGATGATACCATCAGAATCTTGAATCAACTAAAAAATGAAGCTCAGGAACTCAAAGAAACAAATGAGAAGTTGTTGGAGGAAATAAAAACGTTGAAGGCAGAGAAGCATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGACGCAGTTAAAAGCACTGCCAGTTTCACCTGCTGGATTTATGCCCCCTCATGCAGCTGCATATCAAGCTGGGGTCAACAAAATGGCTGTTTTCCCAAGCTATGGTTATTACCCCACGTGGCAGTATCTGCCTGTGTCTGCTCGAGATACATCGCAGGATCATGAACTCAGGCCTCCAGCTGCTTAG 654 0.4694 MDSLEGGSCWDFLDFSLIDDTPPAPTDFLWSNQSVSSGTDLSCGAVVPQENSGKRRRPSLSGNPGTKACREKMRREKLNDRFCDLSSVLEPGRPVRTDKSAILDDTIRILNQLKNEAQELKETNEKLLEEIKTLKAEKHELREEKLVLKADKERIETQLKALPVSPAGFMPPHAAAYQAGVNKMAVFPSYGYYPTWQYLPVSARDTSQDHELRPPAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01966 217 PANTHER BHLH TRANSCRIPTION FACTOR 7 217 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Accr8g01966 217 MobiDBLite consensus disorder prediction 41 67 - -
Accr8g01966 217 CDD bHLH_AtILR3_like 67 142 - -
Accr8g01966 217 SMART finulus 68 119 IPR011598 GO:0046983
Accr8g01966 217 Coils Coil 103 158 - -
Accr8g01966 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 113 IPR011598 GO:0046983
Accr8g01966 217 Gene3D - 66 146 IPR036638 GO:0046983
Accr8g01966 217 Pfam Helix-loop-helix DNA-binding domain 66 113 IPR011598 GO:0046983
Accr8g01966 217 FunFam Transcription factor bHLH104 65 146 - -
Accr8g01966 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 128 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01966 Accr-Chr8 42965477 42967693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01966 35 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 62.827 8.36e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g01966 HLH 8.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01966 - - gmx:100787583 295.819