Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01965 ATGGATTCGCTTGAAGGTGGGAGTTGCTGGGATTTTCTCGATTTCAGCTTGATCGACGATACACCGCCGGCGCCCACCGATTTTCTTTGGTCCAATCAGAGCGTGAGCTCGGGAACTGACCTTTCATGTGGTGCTGTTGTTCCTCAAGAGAACTCCGGGAAGAGACGCCCCAGTTTATCTGGCAACCCAGGGACAAAAGCTTGTCGTGAAAAAATGCGGAGGGAGAAACTGAATGACAGATTTTGTGACTTGAGCTCTGTTTTGGAGCCTGGGAGACCTGTGAGGACTGACAAGTCAGCTATACTTGATGATACCATCAGAATCTTGAATCAACTAAAAAATGAAGCTCAGGAACTCAAAGAAACAAATGAGAAGTTGTTGGAGGAAATAAAAACGTTGAAGGCAGAGAAGCATGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGACGCAGTTAAAAGCACTGCCAGTTTCACCTGCTGGATTTATGCCCCCTCATGCAGCTGCATATCAAGCTGGGGTCAACAAAATGGCTGTTTTCCCAAGCTATGGTTATTACCCCACGTGGCAGTATCTGCCTGTGTCTGCTCGAGATACATCGCAGGATCATGAACTCAGGCCTCCAGCTGCTTAG 651 0.47 MDSLEGGSCWDFLDFSLIDDTPPAPTDFLWSNQSVSSGTDLSCGAVVPQENSGKRRPSLSGNPGTKACREKMRREKLNDRFCDLSSVLEPGRPVRTDKSAILDDTIRILNQLKNEAQELKETNEKLLEEIKTLKAEKHELREEKLVLKADKERIETQLKALPVSPAGFMPPHAAAYQAGVNKMAVFPSYGYYPTWQYLPVSARDTSQDHELRPPAA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01965 216 Coils Coil 102 157 - -
Accr8g01965 216 SMART finulus 67 118 IPR011598 GO:0046983
Accr8g01965 216 PANTHER BHLH TRANSCRIPTION FACTOR 7 216 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Accr8g01965 216 FunFam Transcription factor bHLH104 64 145 - -
Accr8g01965 216 MobiDBLite consensus disorder prediction 47 70 - -
Accr8g01965 216 CDD bHLH_AtILR3_like 66 141 - -
Accr8g01965 216 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 54 127 IPR036638 GO:0046983
Accr8g01965 216 Pfam Helix-loop-helix DNA-binding domain 65 112 IPR011598 GO:0046983
Accr8g01965 216 Gene3D - 65 145 IPR036638 GO:0046983
Accr8g01965 216 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 112 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01965 Accr-Chr8 42965477 42967693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01965 55 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 68.519 1.10e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g01965 HLH 8.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01965 - - gmx:100787583 291.967