Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01962 ATGGAGAGAAAAGGGTGTGGTATTGGGGGTGTGTTCTTCAAGTTCAAGGCACACTTATTGATGATCTTACTTCAACTGGGCTATTCCTTCGTGTATTTCATCGCAGACTCTTCCTTCCAGCATGGCTTCAATCCTTATGTCTATGTAACCTATCGCAATATTGTGGCTGGCCTTGCTCTCTTGCCTTTTGCTTTCTTTCTTGAGAGAAAAACGAGGCCCAAGTTGACACTGGCACTCTTCTTGGAAATTTTTGTGCTTTCTTTGTTGGGGGCAAGTTTGAGTCTAAACATGTACTTCGCCAGCCTAAAATACACGAACCCAACCTTTGCGACTATATTGTACAACACACTAGCTTCCATTACCTTCATTATTGCAGCGATACTTCGGGTTGAGGTTATCAATTTACGCAATCCTCGCAGTATAGCGAAAGTATTAGGGACTGTGGTCTCTTTAGGTGGCGTCATGATTGTGACACTGTACAGAGGACCAATAATAAGAAATATCTGGCCTCCTCTAATTCATATTCATAAAACCAATCATATCCATGAGGAGTGGTTAAAGGGATCGCTCCTTGCAATTGCAAGCTGTGTAGCATGGGCCATTTGGTTCATTATGCAGGGAGTTGTGGCCTCGGGTTTGTTTACGTTCGTTCAAATGTGGTGCACAGAAGAAAAAGGCCCAGTTTTTGTCACTATGTTCAACCCCCTTCTTACAGTTTTAGTGGCTCTTCTTTCCTACTTCGTAGTTGGCGATAAACTTCACCTGGGCTGCATCGTAGGGGCAATCATAGTGGTGATTGATCTGTACTTGCTGATTTGGGGCAAAGAAGAAGAGCAAGTGGCCGATATCAAGATTGCAAAAGAGCGATTGACGTGCAATTCTGATGATCCCGAAAAGCAGGACAACTTAGATCTATAA 918 0.4336 MERKGCGIGGVFFKFKAHLLMILLQLGYSFVYFIADSSFQHGFNPYVYVTYRNIVAGLALLPFAFFLERKTRPKLTLALFLEIFVLSLLGASLSLNMYFASLKYTNPTFATILYNTLASITFIIAAILRVEVINLRNPRSIAKVLGTVVSLGGVMIVTLYRGPIIRNIWPPLIHIHKTNHIHEEWLKGSLLAIASCVAWAIWFIMQGVVASGLFTFVQMWCTEEKGPVFVTMFNPLLTVLVALLSYFVVGDKLHLGCIVGAIIVVIDLYLLIWGKEEEQVADIKIAKERLTCNSDDPEKQDNLDL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01962 305 Pfam EamA-like transporter family 17 158 IPR000620 GO:0016020
Accr8g01962 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 275 - -
Accr8g01962 305 PANTHER WAT1-RELATED PROTEIN 205 286 IPR030184 GO:0016020|GO:0022857
Accr8g01962 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01962 Accr-Chr8 42896849 42899503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01962 9 302 Nodulin-like Gene Family AT4G08300 32.958 4.68e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01962 - - pcin:129308397 483.026