Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01961 ATGGAGAGAAAAGGGTGTGGTATTGGGGGTGTGTTCTTCAAGTTCAAGGCACACTTATTGATGATCTTACTTCAACTGGGCTATTCCTTCGTGTATTTCATCGCAGACTCTTCCTTCCAGCATGGCTTCAATCCTTATGTCTATGTAACCTATCGCAATATTGTGGCTGGCCTTGCTCTCTTGCCTTTTGCTTTCTTTCTTGAGAGAAAAACGAGGCCCAAGTTGACACTGGCACTCTTCTTGGAAATTTTTGTGCTTTCTTTGTTGGGGGCAAGTTTGAGTCTAAACATGTACTTCGCCAGCCTAAAATACACGAACCCAACCTTTGCGACTATATTGTACAACACACTAGCTTCCATTACCTTCATTATTGCAGCGATACTTCGGGTTGAGGTTATCAATTTACGCAATCCTCGCAGTATAGCGAAAGTATTAGGGACTGTGGTCTCTTTAGGTGGCGTCATGATTGTGACACTGTACAGAGGACCAATAATAAGAAATATCTGGCCTCCTCTAATTCATATTCATAAAACCAATCATATCCATGAGGAGTGGTTAAAGGGATCGCTCCTTGCAATTGCAAGCTGTGTAGCATGGGCCATTTGGTTCATTATGCAGGCATACAGCGTGAAGAGATACCCTGCACCATTGTCATTGACCACGTGGGTCTGCCTCGTTGGAGGAGCCCAATCAGCTGTTTTTACGATGATTGTTGAACATAATAAGTCAGCGTGGACTGTGGGTTTCAACGTTGACTTGTGGTCAATATTATATAGTGGAGTTGTGGCCTCGGGTTTGTTTACGTTCGTTCAAATGTGGTGCACAGAAGAAAAAGGCCCAGTTTTTGTCACTATGTTCAACCCCCTTCTTACAGTTTTAGTGGCTCTTCTTTCCTACTTCGTAGTTGGCGATAAACTTCACCTGGGCTGCATCGTAGGGGCAATCATAGTGGTGATTGATCTGTACTTGCTGATTTGGGGCAAAGAAGAAGAGCAAGTGGCCGATATCAAGATTGCAAAAGAGCGATTGACGTGCAATTCTGATGATCCCGAAAAGCAGGACAACTTAGATCTATAA 1077 0.4364 MERKGCGIGGVFFKFKAHLLMILLQLGYSFVYFIADSSFQHGFNPYVYVTYRNIVAGLALLPFAFFLERKTRPKLTLALFLEIFVLSLLGASLSLNMYFASLKYTNPTFATILYNTLASITFIIAAILRVEVINLRNPRSIAKVLGTVVSLGGVMIVTLYRGPIIRNIWPPLIHIHKTNHIHEEWLKGSLLAIASCVAWAIWFIMQAYSVKRYPAPLSLTTWVCLVGGAQSAVFTMIVEHNKSAWTVGFNVDLWSILYSGVVASGLFTFVQMWCTEEKGPVFVTMFNPLLTVLVALLSYFVVGDKLHLGCIVGAIIVVIDLYLLIWGKEEEQVADIKIAKERLTCNSDDPEKQDNLDL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01961 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Accr8g01961 358 Pfam EamA-like transporter family 17 158 IPR000620 GO:0016020
Accr8g01961 358 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Accr8g01961 358 PANTHER WAT1-RELATED PROTEIN 19 339 IPR030184 GO:0016020|GO:0022857
Accr8g01961 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01961 Accr-Chr8 42896849 42899503 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01961 16 354 Nodulin-like Gene Family AT5G07050 40.171 4.42e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01961 - - pcin:129308397 593.578