Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01950 ATGGAAGTTGCCGGTGGAGCTGACGTGGCAGAGAGTGTGGCCCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGTGTCCTCAGCGGGAGCGGCTCCGTTGCCAACGTTACCCTCCGACAACCGGCTGCCCCTGGAGCTGTTGTGGCCCTCCATGGCAGGTTTGAAATTCTATCCCTTACAGGTGCGTTCTTGCCGGGACCCGCCCCTCCCGGCGCGACGGGGCTCACGGTGTATCTCGCAGGAGGACAGGGACAGGTCGTCGGAGGAAGTGTCGTCGGTTCTCTAGTAGCGGCTGGACCGGTTATGGTCGTTGCGGCAACATTTGCTAATGCTACTTATGAAAGACTACCACTTGATGATGATGATGAGGGAGCTAGCGGCGCCGCACAAGGAGGAGGAGGAGGAGGGTCGCCACGGGGAATCGGTAGCAGCGGTGGCCAGCCTCTGCCGGCCGGGCTTCCAGATCCGTCGTCTCTGCCTTTGTATAATCTGCCGCCGAATCTGATGCCCAACGGTGGTGGAGGGCAAGTGGGGCATGAAGCTTTTGCTTGGGCTCACGGAAGGCCACCTTACTGA 576 0.6059 MEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVVAATFANATYERLPLDDDDEGASGAAQGGGGGGSPRGIGSSGGQPLPAGLPDPSSLPLYNLPPNLMPNGGGGQVGHEAFAWAHGRPPY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01950 191 MobiDBLite consensus disorder prediction 119 178 - -
Accr8g01950 191 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 120 - -
Accr8g01950 191 CDD DUF296 2 80 IPR005175 -
Accr8g01950 191 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 187 IPR014476 GO:0003680
Accr8g01950 191 ProSiteProfiles PPC domain profile profile. 1 131 IPR005175 -
Accr8g01950 191 Gene3D - 1 124 - -
Accr8g01950 191 PIRSF ESCAROLA 1 191 IPR014476 GO:0003680
Accr8g01950 191 FunFam AT-hook motif nuclear-localized protein 1 123 - -
Accr8g01950 191 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 109 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01950 Accr-Chr8 42756270 42756845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01950 1 191 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 66.321 1.14e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01950 - - qsa:O6P43_021453 246.128