Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01910 ATGGCCGCTGTTCAACTTCTCCACCTTTTCTTCTTCTTCTTCTTCCTCACTCTTCCTTCTCTGTCTTCTTCTTCCGACGTCGATGCCCTCCTCAAGCTTAAGCAGTCATTCAACAATACTGCTTCTCTTTCTTCATGGCTCCCTAATTCTCCCCCTTGCCGATGGGCCGGAATCATGTGCGACAATAACACCATCATCGGTCTTCATCTTTCCGACATGGGTCTTTCCGGCACAATCGACATTGACGCTGTGTTGGAGATTAAAGGCCTTCGCACCGTCAGCTTGGTGAACAATTCCTTTTCGGGTCCTATCCCAGAGTTCAACAGAGTCGGTGCTCTCAAGGCTTTATATCTATCCACCAACCAATTTTCCGGGCAGATTTCCTCGGATTACTTCTCCTATTTGAACTCATTGAAGAAAATCTGGCTTTCTGAGAACAAATTCTCGGGACCCATCCCTGATTCTATATCCCAGCTAGATAATCTCATGGAGATTCACCTCGAGAACAACGAATTCACTGGATCCATTCCGCAACTAACGCAGAGCATCAAATCGCTGGACATGTCCAACAACAAACTCCAAGGTCCAATCCCAGAGAGCTTAACAAAATTTGGGGCTATTTCCTTCCAGGGAAACGAGGGGCTATGTGGGAAACCTCTGGACAAGGCGTGCAACCAGAAGGGTGCTAGTGAAAATTCCTCGGGCGGAAGCGGCGGCGGCACCATGTTGGTCATTTTCTTCATTGTTTGCTTGTTCATCGCGGTGTGGCTCTTTGTTTCGATCAGGTCAAGGCGCCGTCTAGACCGTGACTTCAGTGTGCTGAGCAGAGGCAGCATGGAGGAGATGGTGCAAGTGCACGTGCCGAGCTCAAGCGAAAGCACGGACTCGAGCCGGAGAGGGACGGGCTCGAAGAGGGGTGCGGCGGCGAAGAAAGAGAACGGTGGGGAACTAGTGGTGGTGAATGAGGAGAAGGGCATGATTGGGATGAAAGATTTGATGAAGGCGGCGGCGCAGGTGCTAGGAAGCGGACCTTTGGGATGCACATATAAGGCGGACATGGATAATGGGTTGAGCGTGGTGGTGTGGAGGAGTAGAGCGATCAATCAGATAGGCAGAGATATTTTCGACGCCGAGATGAGATCCTTTGCAAGGATCAAACATGCTAACATCTTGACCATTTTGGCTTACGCTTTTACCAAAGAAGACAAGTTCATCCTCTCAGAGTACATGCCCAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGGGGGACATCTCATGCCGATTTGACCTGGCCCGTGCGCTTGAAGATAATCAAGGGAATCGCAAAAGGCCTTCGCTTCCTTCATTCTCACTTCTCTTCCTACGATCTTCCCCACGGCAACTTGAAATCCAGCAATGTCCTCCTCACACAAGATTATGAACCACTCCTCTCTGATTACGCCTTACATACGCTTCTCAACCCTAATGCTTTCCCCGCATTGCTTGCTTTCAAAACCCCAGATTACGTGCAGTACCAACTAGTTTCCCAAAAAGCCGACATCTACTGCCTTGGAATCATCATCCTCGAGATCATCACCGGAAAATTCCCTTCTCAGTATCATAGCAACAACAAGGGCGGCACCGATGTTGTGCAATGGGTCCTCGTTGCAATTTCTGAGAGAAGAGAAGCACAAGTGATTGATCCAGAAATAGCAAACACCCCTAACTCTTTAGATCAGATGTTGCAGATCCTCCAAGTGGGAGCTGCTTGCACCGAAAGTAACCCTGAACAACGGATTAACTTGAGTGAAGTCATTAGGAGGATAGAGAAGGTACAAGTCTAA 1827 0.4877 MAAVQLLHLFFFFFFLTLPSLSSSSDVDALLKLKQSFNNTASLSSWLPNSPPCRWAGIMCDNNTIIGLHLSDMGLSGTIDIDAVLEIKGLRTVSLVNNSFSGPIPEFNRVGALKALYLSTNQFSGQISSDYFSYLNSLKKIWLSENKFSGPIPDSISQLDNLMEIHLENNEFTGSIPQLTQSIKSLDMSNNKLQGPIPESLTKFGAISFQGNEGLCGKPLDKACNQKGASENSSGGSGGGTMLVIFFIVCLFIAVWLFVSIRSRRRLDRDFSVLSRGSMEEMVQVHVPSSSESTDSSRRGTGSKRGAAAKKENGGELVVVNEEKGMIGMKDLMKAAAQVLGSGPLGCTYKADMDNGLSVVVWRSRAINQIGRDIFDAEMRSFARIKHANILTILAYAFTKEDKFILSEYMPKGSLLYVLHGDRGTSHADLTWPVRLKIIKGIAKGLRFLHSHFSSYDLPHGNLKSSNVLLTQDYEPLLSDYALHTLLNPNAFPALLAFKTPDYVQYQLVSQKADIYCLGIIILEIITGKFPSQYHSNNKGGTDVVQWVLVAISERREAQVIDPEIANTPNSLDQMLQILQVGAACTESNPEQRINLSEVIRRIEKVQV 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01910 608 Gene3D Phosphorylase Kinase; domain 1 301 409 - -
Accr8g01910 608 Gene3D Ribonuclease Inhibitor 182 222 IPR032675 -
Accr8g01910 608 Gene3D Ribonuclease Inhibitor 23 180 IPR032675 -
Accr8g01910 608 SUPERFAMILY Protein kinase-like (PK-like) 338 603 IPR011009 -
Accr8g01910 608 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01910 608 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Accr8g01910 608 Pfam Protein kinase domain 338 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01910 608 MobiDBLite consensus disorder prediction 284 310 - -
Accr8g01910 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 607 IPR046959 -
Accr8g01910 608 FunFam Nuclear pore complex protein NUP107 23 178 - -
Accr8g01910 608 SUPERFAMILY L domain-like 23 210 - -
Accr8g01910 608 Gene3D Transferase(Phosphotransferase) domain 1 410 608 - -
Accr8g01910 608 MobiDBLite consensus disorder prediction 284 301 - -
Accr8g01910 608 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01910 Accr-Chr8 42109402 42111312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01910 1 608 Receptor kinase-like Gene Family AT3G42880 47.484 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr8g01910 Pkinase 4.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01910 - - gmx:100788667 714.531