Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01906 ATGTCGAGCTCCTCTGAATTTTCCGGGCAGAAGCCGGCCAAGTTGCCGGAGAAGCCTTTTTTCTCGCAGACTTGCAGTCTGCTGAGTCAGTATCTGAAGGAGAAAGGCAGCTTTGGAGATCTTTCCCTTGGGATGAAGTGCAGCACCGACGCAATTGGGTCAACTGAAGCAGCTGGTCAGACTGCGACAACCATGGACTTATTTCCAACTAAGGAAAACACTGTGACAACACAGGATTTACTCTCTAATTCCAGTGTTCCAAAGGCTTCTAACTCTCCACAACTGACAATCTTTTATGCCGGACAAGTCATAGTTTTCGATGACTTTCCGGCCGAGAAAGCGAAGGAGATCATGTCTTTTGCCAGCAAAGGAAACTCCCAAAGTCAAAACCCTTCTGTTTACACTTTTGCTCAGAGCGCACCTTCGTTTCCTGCTAATTTGGTCAAAGCCTCTGCTGATCCAAGCGCTTCAATCACTCCTCGTCCTCAAGCACCATCCATTCCTGTTACTTGCGATCTGCCTATTATGCGTAACGCATCGCTTCACCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCTCCATATCAAGCAAACAAACCCACGATGGGGCCTAGCAAGCCAGTAGAGTCAATGCCATGGCTGGGCATAGCTGCTAAATCTCCACAAAACTGA 681 0.4787 MSSSSEFSGQKPAKLPEKPFFSQTCSLLSQYLKEKGSFGDLSLGMKCSTDAIGSTEAAGQTATTMDLFPTKENTVTTQDLLSNSSVPKASNSPQLTIFYAGQVIVFDDFPAEKAKEIMSFASKGNSQSQNPSVYTFAQSAPSFPANLVKASADPSASITPRPQAPSIPVTCDLPIMRNASLHRFLEKRKDRIAAKAPYQANKPTMGPSKPVESMPWLGIAAKSPQN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01906 226 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 209 IPR040390 -
Accr8g01906 226 ProSiteProfiles Tify domain profile. 88 123 IPR010399 -
Accr8g01906 226 Pfam Jas motif 174 199 IPR018467 -
Accr8g01906 226 SMART tify_2 88 123 IPR010399 -
Accr8g01906 226 MobiDBLite consensus disorder prediction 195 226 - -
Accr8g01906 226 Pfam tify domain 90 122 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01906 Accr-Chr8 42072638 42074110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01906 1 222 Tify Gene Family AT1G19180 43.396 2.73e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr8g01906 tify 4.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01906 K13464 - gmx:100801449 269.24