Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01902 ATGAAGCCTTTACCGAATGGCTACTTGCCTAATTCTGGCGAAGGAGAAAGAAAAACAATCAACTCAGAGTTATGGCATGCATGTGCTGGACCCCTGGTTTCCTTACCTCCTGTTGGAAGTCTTGTTGTTTATTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGATTTCATACCCAGTTATCCTAACCTTCCATCCAAGTTAATTTGCATGCTTCACAATGTTGCACTACATGCCGATCCAGAAACTGATGAGGTCTATGCACAGATGACCCTTCAACCTGTAAACAAATATGACAAGGAAGCAATACTGGCATCAGACATGGGTCTGAAGCAAAGCCGACAGCCTGCTGAATTCTTCTGCAAAACTCTCACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTACCTCGCAGAGCAGCAGAGAAAATATTTCCACCTCTGGATTTTTCAATGCAACCTCCTGCTCAGGAGATTATTGCGAAGGATTTGCATGACAATACATGGACATTCAGACATATTTACCGCGGACAACCAAAGAGACATCTGCTGACTACAGGTTGGAGTGTCTTTGTCAGCACAAAAAGACTATTTGCTGGAGATTCTGTTCTTTTCATTAGAGATGGAAAACAGCAGCTTCTTGTGGGTACAAGGCGCGCTAATAGATTACAGCCTGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATAGGCATTCTTGCTGCCGCAGCTCATGCCGCTGCAAATAACAGCCCATTTACCATATTTTACAATCCAAGAGCTAGCCCTGCTGAATTTGTAATTCCATTGGCCAAGTATAATAAAGCAATGTACACCCAAGTTTCCCTTGGAATGAGGTTTAGAATGATGTTTGAGACTGAGGAGTCAGGAGTTCGTCGATACATGGGTACAATTACAGGGATCAGTGACTTGGATCCTGTGCGGTGGAAAAATTCACAGTGGCGCAACCTTCAGGTCGGATGGGATGAATCAACAGCCGGCGAGCGCCCTAGCAGAGTATCAATTTGGGACATTGAACCGGTAGTTACTCCTTTCTATATTTGCCCGCCTCCTTTCTTCAGGCCTAGATTCCCCAAGCAACCAGGAATGCCAGATGATGAGTTTGACATGGAAAATGCATTCAAGAGAGCTATGCCCTGGTTTGGAGATGACTTTGGCATGAAAGATGCCTCAAGTTCAATGTTTCCTGGTTTGAGTTTAGTTCAGTGGATGAGCATGCAGCAGAATAACCAGTTATCTGCTGCACAATCAGGAATGGTCCCATCTGTGCTTTCATCCAATTCCCTTCATAATAACCTCGGCAATGATGATCCGTCCAAATTATTGAGTTTTCAAAACCCTGTCCTCTCTGCATCAAATCTTCAATTTAACCGGCCAAATTTACCGAACCAAGTCAACCAATTGCAACAAGCCCCAACATCATGGCCTCAGCAGCAGCAACAGGCACAGCAGCAGCAGCAGCAGCAGATGCAATCCTCGTTGCAAGCACCTGTAAACCAGCTCCGGCAGCAGAGGCAGCAGCCACAGCCTCAGCAGCAACAGCAGCTTCCTGAGCCACAAAATCTGACACAGCAGCAGCAGTCCCAATTGCAGCAACAGCGAGCACAACCACCGCAGCAGCAGCAGCCATGCCAACAGGCCATTATGAACAATGGGGTGATTGGGTCTAGCCAGATTCCAAATCAGAATGTGCAACAATCAATAGCCTACTCTCAGCTTCAGCAGCAGCAGTTACTCTCAGCTAGCATGCCACTTCAGCAAAATGTTCAATCAGCCAGCAAGAATACATTCCCTCTCACAAACTTACCACAAGATTCACAGTTTCAGCCACAGATAGACCAGCAAGCCACTCTCTTGCAGAGGCAGCAGCAGCAGCAAAATCAATTGCAGATATTGCAACAAAGCTTGTCACAGAGGGCCCCTCAACAACCACAAGTGGCTCAATTGCCTCAACAAAACCTGTCAGAACAACAGTTGCAGTTGCAGTTGCTGCAAAAATTGCAGCAGCAGCAGCAATTTCTTTCTCCAGCTAGTTCACTTTTGCAGCCTCAGGTGCTACAGCAACAGCAAGCACACCTACAAAACCAACAACTACCACAACCGCCTCTATCTCAGCATCAGCAGCTCAGCAACAATGCATTATCTGCAGAGAAGCTTCTGGGCAGCAACAGCTTTTCTTCTTCACCTCTGATACAACCACAACAGCTTCCTTTGAACCCTGCCCAGAATGCACCGAAACCACTTACAACTACCAAAGCTCCTTCCAATCTTACAGATGGAGATGCCCCATCATGTTCAACCTCACCATCAACTAATAACTGCCAAGTATCTCCACCAAACCTCCTGAAGAGAAATCAACAAGTGCCAGCAACATTTGGGGGGAGCTTAGTAGTTGAGCCCACTAATAATCTGGTACAGGAGCTTCAAGGCAAGTCTGATATCCAGATTAAACATGAGTTGCCAGGTGTAAAAGGGCCTGACCAGCTAAAGTATAAAGGGACAATAACTGATCAATTGGAAGCCTCCTCTTCTGGAACATCTTACTGCCTTGATCCTTGCAGTGTGCAGCCCAACTTCCCCCTTCCCAATTTCTGCATGGATGGGGATGTCCAATCGCATCCTAGGAATAGTCTTCCATTTGCCTCTAATCTTGATGGGTTGACGCCTGATACTTTGCTCTCGAGAGGGTATGACTCACAAAAAGATCTTCAAAATCTGCTCTCTAACTATGGTGGCGCTCCAAGAGATATAGAAACTGAGCTGTCAACTGCTGCTATCAGCTCACAGTCATTTGGTGTGCCAAGTATGCCCTTTAAGCCTGGCTGCTCAAGTGATGTTGCCATCAATGAAACTGGGGTTTTGAATAATAGCTTGTGGGCTAACCAGACTCAACGAATGCGAACGTATACTAAGGTTCAAAAACGTGGCTCTGTTGGAAGGTGCATTGATGTCACTCGTTACAAGGGATATGATGAACTCAGACATGACTTGGCTCGTATGTTTGGGATTGAGGGGCAACTGGAAGATCCTCAAAGGACTGACTGGAAACTAGTATATGTAGATAATGAAAATGACATTCTTCTTGTTGGGGATGATCCTTGGGAAGAATTTGTAAGCTGTGTTCAGAGCATAAAGATACTGTCATCTGCTGAAGTGCAGCAGATGAGCTTAGACGGGGATTTGGGTAATGTTCCAATATCCAATCAAGCTTGTAGTGGGACAGATAGTGGTAACGCATGGAGGGGACAATACGATGATAACTCGGCCGCCTCATTTAATCGATAA 3333 0.4587 MKPLPNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIIAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKQQLLVGTRRANRLQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPAEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPRFPKQPGMPDDEFDMENAFKRAMPWFGDDFGMKDASSSMFPGLSLVQWMSMQQNNQLSAAQSGMVPSVLSSNSLHNNLGNDDPSKLLSFQNPVLSASNLQFNRPNLPNQVNQLQQAPTSWPQQQQQAQQQQQQQMQSSLQAPVNQLRQQRQQPQPQQQQQLPEPQNLTQQQQSQLQQQRAQPPQQQQPCQQAIMNNGVIGSSQIPNQNVQQSIAYSQLQQQQLLSASMPLQQNVQSASKNTFPLTNLPQDSQFQPQIDQQATLLQRQQQQQNQLQILQQSLSQRAPQQPQVAQLPQQNLSEQQLQLQLLQKLQQQQQFLSPASSLLQPQVLQQQQAHLQNQQLPQPPLSQHQQLSNNALSAEKLLGSNSFSSSPLIQPQQLPLNPAQNAPKPLTTTKAPSNLTDGDAPSCSTSPSTNNCQVSPPNLLKRNQQVPATFGGSLVVEPTNNLVQELQGKSDIQIKHELPGVKGPDQLKYKGTITDQLEASSSGTSYCLDPCSVQPNFPLPNFCMDGDVQSHPRNSLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFGVPSMPFKPGCSSDVAINETGVLNNSLWANQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDNENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPISNQACSGTDSGNAWRGQYDDNSAASFNR 1110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01902 1110 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Accr8g01902 1110 Gene3D - 124 227 IPR015300 -
Accr8g01902 1110 SMART B3_2 126 228 IPR003340 GO:0003677
Accr8g01902 1110 Pfam AUX/IAA family 978 1069 IPR033389 -
Accr8g01902 1110 ProSiteProfiles PB1 domain profile. 983 1076 IPR000270 GO:0005515
Accr8g01902 1110 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 584 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr8g01902 1110 FunFam Auxin response factor 289 361 - -
Accr8g01902 1110 MobiDBLite consensus disorder prediction 740 795 - -
Accr8g01902 1110 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Accr8g01902 1110 SUPERFAMILY CAD & PB1 domains 996 1061 - -
Accr8g01902 1110 FunFam Auxin response factor 978 1072 - -
Accr8g01902 1110 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Accr8g01902 1110 Gene3D - 289 360 - -
Accr8g01902 1110 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr8g01902 1110 Gene3D - 978 1072 - -
Accr8g01902 1110 MobiDBLite consensus disorder prediction 482 560 - -
Accr8g01902 1110 CDD B3_DNA 125 217 IPR003340 GO:0003677
Accr8g01902 1110 FunFam Auxin response factor 124 228 - -
Accr8g01902 1110 Coils Coil 635 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01902 Accr-Chr8 42010024 42017621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01902 1 487 B3 DNA Binding Superfamily AT1G19220 82.957 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr8g01902 AUX_IAA 9.2e-10 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01902 K14486 - zju:107404980 1448.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01902 8 42010024 42017621 Accr8g01902 8 42010024 42017621 ECH