Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01899 ATGAAGCTCAAGTTCATAGCTCTTCAGTTTTTTCTACTTTTGGTGGCTCTTCTTGGTTTCAATGCACGGGCCTCAAATGTGACAGTAAATGAGACGACTTGTGGTTCCTTAAACGGTCCTCAGAGTAGAGAAAGTGGAGGTCCATGCCCGGCTGGTTGGGTTGTTGGCCCTAATAAAGCCAGGTGCTTTTACCATGTGGGAAAGCCTCAATCTTGGAATGACTCAGAGACCCATTGTAATAAATGTGGCGGACATTTAGCTTCTTTGATATCTCTTCCAGAACTACACTTTGCTCAGAGTCTGTGTGGTGACAGTTGCTGGGTTGGAGGAAGAAGAATTAACTCCACAGCTGGTTATGAGTGGGTGTGGTCTGACAAATCTCTGTGGAATGAGTCTATGCTTCCTTTGATGCTTGATCAAACTAATTGTACTGGATTATTCTGCAACACAACAGGTGCAGTCAATACATGTACTATAATGACTAATCATTCAGATTCTCTTGTGAGCGATACATGCGACAAACTGAATGCTTCAATGTGTGTATTTGATATAGATAAAAAATGTTACCACATGCGCTGCCACAGGGAATATCTTATCATCCTTGCAGGGGTGAGTGCATTGATCCTCTGCACAATGTCAGCTGTTGTGATATGGCTTCTTGCACATAAACGGAGCAAGAAGAGTAAAAGATCCAGAAAAGTATCTAATCCAGCTGCTTCTCAGTCAGTTCCTCCCTCATGGAAAGTTTTTACCAAAGAGGAATTAAGATCAATTACAAAGAACTTTAGTGAAGGTAACCGTCTTGTTGGGGATGCCAAGACTGGTGGTACATATAGTGCAGCCCTACCTGATGGCTCAAAGGTTGCAGTCAAGAGATTGAAGAAGTCAACTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCAAGACTTCGTCATCCTAATTTAGTGGCTGTGAAGGGATGCTGCTATGATCACGGTGACCGCTACATTGTTTATGAGTTCGTAGTTAATGGCCCTTTAGACAAATGGCTACATCATATACCAAGGGGAGGTCGCATTTTAGATTGGACTATGAGAATGAAAATCGCTACAACACTTGCTCAAGGAATTGCTTTTCTGCATGACAAGGTAAAGCCACATGTTGTTCATCGGGATATACGGGCCAGTAATGTGCTGCTAGATGAGGAGTTTGGAGCCCACCTTATGGGATTTGGTCTATCCAAGTTCGTGCCATATGAAGCGATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAGTATGTGTATAGAAATGAGCTCACAACGAAGAGTGATGTTTACAGTTTCGGTGTGCTGTTACTTGAGATAGTGAGCGGGCGTAGACCTGCACAGGCAGTGGATTCGGTGGGTTGGCAGAGCATATTCGAGTGGGCGACACCACTAGTGCAAGCTCATCGCTATCCTGAACTCTTGGATCCTCATATAACTTCGTCATCATCGTCATCTAGTATCCCCGAGGCTAGTACAATACAGAAGGTGGTTGACCTTGTCTATTCATGCACACAGCATGTCCCATCTATGCGTCCTAGAATGTCCCATGTTGTCCATCAGCTCCAACAATTGGCTAACCCACCAACCAAGTGA 1653 0.441 MKLKFIALQFFLLLVALLGFNARASNVTVNETTCGSLNGPQSRESGGPCPAGWVVGPNKARCFYHVGKPQSWNDSETHCNKCGGHLASLISLPELHFAQSLCGDSCWVGGRRINSTAGYEWVWSDKSLWNESMLPLMLDQTNCTGLFCNTTGAVNTCTIMTNHSDSLVSDTCDKLNASMCVFDIDKKCYHMRCHREYLIILAGVSALILCTMSAVVIWLLAHKRSKKSKRSRKVSNPAASQSVPPSWKVFTKEELRSITKNFSEGNRLVGDAKTGGTYSAALPDGSKVAVKRLKKSTFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLHHIPRGGRILDWTMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGFGLSKFVPYEAMHERTVMAGGTYGYLAPEYVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHITSSSSSSSIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLANPPTK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01899 550 Pfam Lectin C-type domain 69 181 IPR001304 -
Accr8g01899 550 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 339 550 - -
Accr8g01899 550 SMART tyrkin_6 262 541 IPR020635 GO:0004713|GO:0006468
Accr8g01899 550 SUPERFAMILY C-type lectin-like 31 184 IPR016187 -
Accr8g01899 550 ProSiteProfiles Protein kinase domain profile. 263 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01899 550 FunFam C-type lectin receptor-like tyrosine-protein kinase 240 338 - -
Accr8g01899 550 ProSitePatterns Tyrosine protein kinases specific active-site signature. 385 397 IPR008266 GO:0004672|GO:0006468
Accr8g01899 550 SMART CLECT_2 49 181 IPR001304 -
Accr8g01899 550 Gene3D - 32 183 IPR016186 -
Accr8g01899 550 Gene3D Phosphorylase Kinase; domain 1 221 338 - -
Accr8g01899 550 Gene3D Transferase(Phosphotransferase) domain 1 339 546 - -
Accr8g01899 550 SUPERFAMILY Protein kinase-like (PK-like) 236 542 IPR011009 -
Accr8g01899 550 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 171 544 - -
Accr8g01899 550 CDD CLECT 61 180 - -
Accr8g01899 550 Pfam Protein tyrosine and serine/threonine kinase 284 541 IPR001245 GO:0004672|GO:0006468
Accr8g01899 550 ProSiteProfiles C-type lectin domain profile. 58 181 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01899 Accr-Chr8 41970560 41975239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01899 79 547 Receptor kinase-like Gene Family AT1G52310 69.182 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Accr8g01899 PK_Tyr_Ser-Thr 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01899 - - cave:132182905 811.216