Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01889 ATGGGGGGGCCGAAGCAGCAGCAGCAGCAGCAACAGCAACAGGTGGGATACGCGGAGCAGCTTGTCGCCGTTAACCGCTATAATCCTGACATCCTTCCCGATCTTGAAAACCATGTTAACGAGCAGGTCTCATCACAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCTCAGATTGTAGCCCGCATATTGGTTAAGGCCCTCATGGCAATGCCAGCTCCAGACTTCAGTCTTTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATCGTTTTATCTCACTATTTGGAGACAGGAAGATTTCGCCAGTTTTGGGATGAAGCAGGAAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCAATTCAAGGTTATGCAATTCATGTCCTCTCGTTAACTTACCAAAGAGTTCCTAGATCTGTGCTGGCTGAGGCCATCAACATAGAAGGCTTGGCCTTGGACAAATTCCTTGAACACCAAGTAGCTAACAGTGGTTGGATCATTGAGAAAGGCCATGGCAAGGGTCAGCTCATTGTCATACCAAAAAATGAATTTAATGACCCTGCATCGAAGAGAAATGCTGCAGACAGTGTGCCGTTGGAGCAAATTACACGCATTTTCCCTATTCTTGGATGA 702 0.4615 MGGPKQQQQQQQQQVGYAEQLVAVNRYNPDILPDLENHVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAGKSRHIVEAVPGFEQAIQGYAIHVLSLTYQRVPRSVLAEAINIEGLALDKFLEHQVANSGWIIEKGHGKGQLIVIPKNEFNDPASKRNAADSVPLEQITRIFPILG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01889 233 Gene3D - 129 231 IPR036388 -
Accr8g01889 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 5 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Accr8g01889 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 9 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
Accr8g01889 233 ProSiteProfiles PCI domain profile. 48 207 IPR000717 -
Accr8g01889 233 FunFam Eukaryotic translation initiation factor 3 subunit K 8 126 - -
Accr8g01889 233 Pfam CSN8/PSMD8/EIF3K family 68 195 IPR033464 -
Accr8g01889 233 Gene3D ARM repeat; domain 1 7 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Accr8g01889 233 SUPERFAMILY ARM repeat 11 136 IPR016024 -
Accr8g01889 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Accr8g01889 233 FunFam Eukaryotic translation initiation factor 3 subunit K 129 232 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01889 9 233 Eukaryotic Initiation Factors Gene Family AT4G33250 74.336 1.85e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01889 K15028 - cpap:110812019 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01889 8 41800484 41803009 Accr8g01889 8 41800484 41803009 ECH