Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01871 ATGGAGGGAAAGCTTGACTCCGACGATGGCGTGAAGCCCGTGACGGAGCAAGGAGCTGGAGGAGAGAAGGGCCTTGACGTGGTTCCAGAATCTTCTCCTCTCCCTGCGAATTCTGGCAAAAATGTTGATGGTGATGCTTGCGATGGAGAGGCTGTTGAAGAATCTGCTGGAGATTTATTGGGAAAGAAGCATCTCTCTGCAAACAGATCATTGCCAGCATCTGGATCGAATGCCTCTCAGCTCACTATCTTCTTCAACGGGAATGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAGATAATACGTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATGAAGAATGGAATACAGTCCTCCTTTACTTCACCCATTCCCACAAGGCCATCTTCTCCACAGGGAACTCCTAGTAACGCGGCTTCACCAAAACCTCTCTGTTTTCCTGGGCAGAAGAGCTCCATTTGTGGGTTGCAAGAATTTCCAATTGCGCGCAGACAGTCACTGCAGCGCTTTCTTGAGAAGCGGCGAGATAGGTTGGGGAGCAGAGCCCCATATGCTTCTCCAGCAAAAACTAAAGTGTCTGAGAATACAGAGAACAGCTGCAGTGCTGATAATGCACCTGATCTGGTTTCCTTCAAACACTCACAGGAGGAGATTCAACCTAGTATCACAGCCTCTTAA 690 0.4855 MEGKLDSDDGVKPVTEQGAGGEKGLDVVPESSPLPANSGKNVDGDACDGEAVEESAGDLLGKKHLSANRSLPASGSNASQLTIFFNGNVCVYDGIPAEKVHEIIRIAASAAKSADMKNGIQSSFTSPIPTRPSSPQGTPSNAASPKPLCFPGQKSSICGLQEFPIARRQSLQRFLEKRRDRLGSRAPYASPAKTKVSENTENSCSADNAPDLVSFKHSQEEIQPSITAS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01871 229 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 201 IPR040390 -
Accr8g01871 229 MobiDBLite consensus disorder prediction 116 146 - -
Accr8g01871 229 Pfam Jas motif 164 188 IPR018467 -
Accr8g01871 229 MobiDBLite consensus disorder prediction 179 229 - -
Accr8g01871 229 MobiDBLite consensus disorder prediction 116 143 - -
Accr8g01871 229 ProSiteProfiles Tify domain profile. 74 109 IPR010399 -
Accr8g01871 229 MobiDBLite consensus disorder prediction 1 55 - -
Accr8g01871 229 Pfam tify domain 77 108 IPR010399 -
Accr8g01871 229 MobiDBLite consensus disorder prediction 193 209 - -
Accr8g01871 229 SMART tify_2 74 109 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01871 Accr-Chr8 41562735 41566166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01871 43 188 Tify Gene Family AT5G20900 45.098 2.79e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr8g01871 tify 3.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01871 K13464 - gmx:100306045 194.897