Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01866 ATGAGAACAGGAGAAAAAGTTGATGGGCAGCAGCAAACTCAGTCATCATCTTCTTCTTCTTCTTCAATTGATAGCAGTAATTACCCTTTGGGGACTGCGAAAACTGCAACAGCTTCATCTTCATCATCATCTTCTTCTTCATGTCTCTCAAGTGTTTGTAGAAATACTTCTAACAGTTCCAGAACTGATTTGATCACTGACCTCAGACTTGGTCTTACCATTTCTCCTTCTTCTTCTCAACCTGGCTTTCCCAATTCAAATCCCAGGTCAAGGAATCAAACTTCAGATTGGCCTCCAATAAAGTCAATATTGAGAAGCACTCTTGTGGAGAAACAAAACCAGTGGAGCCAAGTAAAGCCTTCCTTATTTGTCAAAGTGTACATGGAAGGCATACCCATTGGTAGAAAATTGAACCTTCTGGCTCACCATAGTTATGATGGACTTGTTAGAGCCCTAGTCCACATGTTCAGGACCACCATCCTCTGCCCTAATTCCCAACCACTTCATTCTGGAAATTTTCATGTGTTAACTTATGAAGATCAAGAAGGCGACTGGATGATGGTTGGGGATGTTCCATGGGAGATGTTCTTGACCAGTGTGAAAAGGCTGAAGATTACCAGAGCAGACAGATGCTAA 636 0.4198 MRTGEKVDGQQQTQSSSSSSSSIDSSNYPLGTAKTATASSSSSSSSSCLSSVCRNTSNSSRTDLITDLRLGLTISPSSSQPGFPNSNPRSRNQTSDWPPIKSILRSTLVEKQNQWSQVKPSLFVKVYMEGIPIGRKLNLLAHHSYDGLVRALVHMFRTTILCPNSQPLHSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01866 211 MobiDBLite consensus disorder prediction 1 58 - -
Accr8g01866 211 ProSiteProfiles PB1 domain profile. 121 210 IPR000270 GO:0005515
Accr8g01866 211 Pfam AUX/IAA family 15 207 IPR033389 -
Accr8g01866 211 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 209 IPR003311 GO:0005634|GO:0006355
Accr8g01866 211 SUPERFAMILY CAD & PB1 domains 117 205 - -
Accr8g01866 211 Gene3D - 116 211 - -
Accr8g01866 211 MobiDBLite consensus disorder prediction 75 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01866 Accr-Chr8 41502757 41504005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01866 124 211 B3 DNA Binding Superfamily AT2G46530 34.091 2.11e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr8g01866 AUX_IAA 3.2e-35 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01866 K14484 - gmx:100818083 250.366