Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01860 ATGGAAGGACAGGTTTCATTAAAAGAGTTGCTGCAAGTTGAGAAAAAGCCATCACACGCATGTGACAGCAAAACTCAAGAAACCTCCATCAACAACAGTATGGGGCTTAATTTTCTCAGTTTGGGCCTGAATATCTCAGAAAAAAACCACCAAAATCAAGAGCAGCCATTTATCCAAGCAGGTTTGCTGAGAATTAAGCTAGAGGAAGCAAAGAAAGAGAATCAGAATTTAAGGGCTATGCTAAAACAAATTACTGAACACTACACTTCTCTTCAGAATCACCTTCTTTTGGCTATGCAGAAGCAGCAGCAATCACCACCGCCTCCAAATTATCAAGATTTTCTGAAGCAGAATAGAGCCGATCATGTCATAATGATGGAGAAAGCAGCCTTGCAAGGAGCTAAAAGAATGACAGATCAAGCATTTGAGCCATGTTGCAGGAAGGCTAGAGTTTCCATAAGGGCACGTTCTGATTTTTCTCTGAGAGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGACAGCTAAGAATAACCCTTGTCCTCGAGCTTATTATCGTTGCAGCATGGGAAATGAATGCCCAGTTCGTAAACAGATGCAAAGGTGTGCTAAGGATGATACTGTATTTATTACAAGTTATGAAGGAAGCCATAATCATCCACTCCCTGCAGCAGCCAAACCTATGGCAAGCATAACATCAGCAGCATTAAGCATGTTACTTTCAGGCTCAACCACTAGTCCTACACAAAATAATAGCACCACTCTGCTAAATTCAGGCTTATTCTCTTCATTATCTGCTTCTTACTCTAGTGGCCTGGCTTCATCATGTCCTACAATAACACTGGACTTGACCATTCCCTCTAAAAACAACTCTTTGAACTTCCAAAGGCCTACCTCATCACTGAACCAGAGCCAATCATTCCCTTTCTCATTGCATGGCTCTGCTCAAGAAACTGAGAGTCTGAACTTGTTTGCTAAGTCTCTGACCACAATGAAGCCTGAGAAAAATCTTTGCTTGGAGGATTTAGTTGGTGCACCTATGGCCAAAGATTCTTCTTTTAAAGCAGCATTTGTTACAGCAACGTCTTCATTCACTGAAGAAACTCAGAAACTTAATAACCACAATGAACTGAGTAAGAGTGGGCCATGCCCTTCTTCTAAGATGCCCTCTTTGCTGAATCAGTCCTGCAACACTGGATTGATTCAGAGCCGACCATTGTGGAGATGA 1230 0.4187 MEGQVSLKELLQVEKKPSHACDSKTQETSINNSMGLNFLSLGLNISEKNHQNQEQPFIQAGLLRIKLEEAKKENQNLRAMLKQITEHYTSLQNHLLLAMQKQQQSPPPPNYQDFLKQNRADHVIMMEKAALQGAKRMTDQAFEPCCRKARVSIRARSDFSLRGDGCQWRKYGQKTAKNNPCPRAYYRCSMGNECPVRKQMQRCAKDDTVFITSYEGSHNHPLPAAAKPMASITSAALSMLLSGSTTSPTQNNSTTLLNSGLFSSLSASYSSGLASSCPTITLDLTIPSKNNSLNFQRPTSSLNQSQSFPFSLHGSAQETESLNLFAKSLTTMKPEKNLCLEDLVGAPMAKDSSFKAAFVTATSSFTEETQKLNNHNELSKSGPCPSSKMPSLLNQSCNTGLIQSRPLWR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01860 409 Gene3D WRKY domain 147 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g01860 409 Coils Coil 60 87 - -
Accr8g01860 409 SUPERFAMILY WRKY DNA-binding domain 156 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g01860 409 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g01860 409 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g01860 409 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 45 376 IPR044810 GO:0003700
Accr8g01860 409 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01860 Accr-Chr8 41451873 41454204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01860 134 285 WRKY Transcription Factor Family AT4G04450 58.442 9.09e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr8g01860 WRKY 9.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01860 - - pcin:129300593 536.569