Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01852 ATGACAAGAGAGACAAGTTCAGATGGAGAAATTATCACTAATCCTGTAGGTGAAAGTCCTGAAAAAGTTCAGGGAGAGTCAGATAAGCATGAGGATTCAAAGAAGATGACGAAGCAAAAAGATGAATCCAACAAGACTGTACCTTTTTACAAGCTTTTCTCATTTGCAGATTCTTTGGATTATCTGTTGATGCTTGTGGGGACAGTTGGTGCTGTTGCAAATGGAATAGCTATGCCCTTAATGATTATATTCATTGGAGATACAATTGATGCTTTTGGAAGATCTGCAGAAACCAAACAAGTGTTCCATGAAGTTTCCAAGGTGTCTCTGAAATTCGTATACTTGGCAGTTGGCGCCTTTCTCGTGTCATTTCTTCAGGTGACTTGTTGGATGGTCACTGGAGAAAGACAGGCTGCAAGAATAAGAGGTTTATACCTGAAGACAATTTTGAGGCAGGACATTAGTTTCTTTGATAAGGAAACTAACACTGGTGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCATACAGGGCGTGGCAACTTTTTTTGGAGGTTTTATCGTAGCATTCATTGAGGGATGGCTTTTAACTCTTGTCATGCTATGTTCTATTCCTCCTGTTGTGTTTTCTGGTGCTGTGATGAGCATTGTTCTTGCCAAAGCGACAACCCAAGGACAAAAAGCTTATTCCGCTGCTGCAAATGTAGTAGACCAGACTATTGGTTCTATCCGAACTGTTACATCATTCACAGGGGAGAAGCAAGCTATAGCTAAATATGATCAGTTCTTGATTAAAGCGTACAGGACTAGTGTGCAAGAGGGACTTGCTTCTGGTTTGGGTTTTGGTTCAACCTATCTTCTCTTTTACTTCACTTATGGTTTGGCAGCATGGTATGGTGGAAAAATGGTACTGGAGAAAGGATATACAGGAGGGAAAGTTATAACTGTAATTTTTGCAGTTGTTACGGCCTCCTTGTCTCTGGGGCAGGCATCTCCAAGTCTAAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTCTAAGATGTTTGAAACAATAAAAAGGAAGTCAGACATCGATGCTTATGACACGACCGGCTTGCAGCTACACGATATACGTGGGGATATAGAACTGAGGAAAGTTTGCTTTAGTTATCCTGCGAGGCCGAATGAACTCATATTCAATGGATTTTCTCTCTCAATACCAAGTGGAACTACAACAGCTTTAGTAGGACAAAGTGGTAGTGGAAAGTCAACAGTTATTAGTCTGATAGAAAGATTCTATGATCCACAAGCTGGTGAAATTCTCATTGATGGTTTCAATATCAAAGAATTGCAGCTAAAATGGATGAGACAGAAAATAGGCCTTGTCAGCCAAGAACCAGTTTTGTTTACTTGTAGCATTAAAGAGAACATTGCTTATGGTAATGACGGTGCAACAGATGAAGAAATCAGAGCTGCAGCTGAGCTTGCTTATGCTGCAAAATTCATAAATAAACTTCCTCGGGGCTTGGACACAATGGTTGGTGAACATGGAGCTCAGCTGTCTGGGGGTCAAAAGCAGAGGGTAGCCATAGCAAGAGCAATATTGAAAGACCCAAGAATTCTTCTTCTTGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATAGTACAAGAGGCACTGGACAAAATAATGATAAATAGAACCACTGTTATTGTAGCACATCGCTTGAGTACTGTAAGGAATGCTGATATTATTGCCGTTATTCAGCAAGGAAAAACAGTAGAAAAGGGTTCACATGCTGAGCTCACTAAGGACCCTGATGGAGCCTATAGCCAACTCATTAGATTGCAGGAAACAAGGGAGTCGGAGAATATAAATGCAAATGACACTGATAAACCAGAAAGCATACTGAATTCTGAAAGGCAATCAAGCCAGCGACTTTCTTCCATAAAATCTGTAAGTAGAGAGTCATCTGGACTTGGAAGAAGCAGTCGTCATTCATTCTCATTGTCATATGGTGTGCCCCCAACAAATGGACTCTTTGAAACAGCAGATGCAGAACATGAAGCTCCTTGTTCAGCAGATTCACCAAAACCTCCAGATGTGCCACTTTACCGCCTGGCTTATCTAAACAAACCCGAGATTCCAGTCTTGCTTATAGGGACTCTATTTGCTGTGGCAAATGCAGCAATATTCCCAGCTTTCGGGTTACTGCTCTCAGAAATGATAAACACTTTCTATGAACCTGCAGATAAACTCAGTAAAGATTCAAAGTTTTGGGCTTTGATATTTGTTGCCCTTGGCGTGGCATCCCTCTTAGTAATTCCAGCAAAGTTCTACTTTTTTGCTGTTGCTGGTGGTAAGTTGATAAGAAGGATCAGGTTAATGTGTTTTGAGAAAATAATCCATATGGAAGTAAGTTGGTTTGATGAATCTGAGCATTCAAGTGGAGTCCTTGGAGCCAGGCTATCTACAGATGCAGCTTCTGTCCGAGCTTTGGTTGGAGATGCATTTGTTTTGCTGGTTCAAAATATTGCTACTGCAGTTATTAGCTTGGTCATTGCTTTGGAGGCATGCTGGCAACTTGCTCTTATAATTCTTGCTATGCTACCCTTATTAGTACTCAATGGATACGCCCAGTTCAAGGTCATCGAAGGTTTCAGCGCAGACGCCAAGAAATTGTATGAGGAAGCAAGTCAAGTGGCAAATGATGCAGTAGGGAGCATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAATTATACCATAGAAGATGTGAAGGGCCGATTAAAGCAGGCATAAGGAGAGGGATTCTGAGTGGAACTGGATTTGGTTTATCGTTCTTTTTGCTGTTTTCTGTCTATGCATGCAGTTTCTACGCTGCAGCTCGACTCGTACAAGATGGCAAATCATCATTCTCAGATGTTTTTCGAGTCTTCTTTGCTCTCACTATTGCAGCATTTGGAATCTCCCAATTTAGCTCCTTGGCTCCTGACTCAAGTAAAGCAAAGAGTTCCGTTGGTTCTATATTTGCAATTATTGATGGGGAATCAAAAATAGACCCAAGTGATGCCTCTGGATTGACATTGGAACACTTAATGGGAGAAATTGAATTTCACCATGTCAGTTTCAAGTATCCAACCAGACCTGATTTTCAAGTATTCAGAGATCTTACCTTGAGCATTCGTCCAGGAAAGACAGTGGCTCTAGTTGGAGAAAGTGGAAGTGGGAAATCAACTGTGATCTCTTTGTTGCAGAGATTTTATGATCCTGATTCAGGTCAAATTACATTGGATGGAATAGAAATCCAAAGGCTACAGGTAAAATGGTTGAGACAGCAAATGGGTTTGGTGAGTCAAGAGCCTATGTTGTTTAATGACACAATCAGAGCCAATATTGCATATGGAAAGGGAGGAGATGCAACAGAGGCTGAAATTATAGCTGCAGCAGAACTTGCAAATGCTCACAAGTTCATTTCTAGTTTGCAGCAGGGGTATGATACAATAGTAGGAGAGAGAGGAGTTCAGTTATCCGGGGGACAGAAGCAGCGGGTGGCCATTGCGCGAGCCATAGTGAAGAATCCGAAGATATTACTTCTGGATGAAGCAACCAGTGCCCTGGATGCAGAATCTGAGAAAGTGGTGCAAGATGCATTGGATCAAATTATGGTGGAAAGAACCACAGTAATAGTGGCTCATAGGTTATCCACGGTCAAGAGTGCAGATTTGATTGCAGTAATTAAAAATGGAGTCATAGAAGAGAAGGGAAAGCATGAATCTTTGCTCAACAAAGGTGGTGCCTATGCTTCCTTAGCTGCATTGCACACAACAAGTTCTTCCATAAACGAACTCAATTGA 3891 0.4169 MTRETSSDGEIITNPVGESPEKVQGESDKHEDSKKMTKQKDESNKTVPFYKLFSFADSLDYLLMLVGTVGAVANGIAMPLMIIFIGDTIDAFGRSAETKQVFHEVSKVSLKFVYLAVGAFLVSFLQVTCWMVTGERQAARIRGLYLKTILRQDISFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQGVATFFGGFIVAFIEGWLLTLVMLCSIPPVVFSGAVMSIVLAKATTQGQKAYSAAANVVDQTIGSIRTVTSFTGEKQAIAKYDQFLIKAYRTSVQEGLASGLGFGSTYLLFYFTYGLAAWYGGKMVLEKGYTGGKVITVIFAVVTASLSLGQASPSLSAFAAGQAAASKMFETIKRKSDIDAYDTTGLQLHDIRGDIELRKVCFSYPARPNELIFNGFSLSIPSGTTTALVGQSGSGKSTVISLIERFYDPQAGEILIDGFNIKELQLKWMRQKIGLVSQEPVLFTCSIKENIAYGNDGATDEEIRAAAELAYAAKFINKLPRGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDKIMINRTTVIVAHRLSTVRNADIIAVIQQGKTVEKGSHAELTKDPDGAYSQLIRLQETRESENINANDTDKPESILNSERQSSQRLSSIKSVSRESSGLGRSSRHSFSLSYGVPPTNGLFETADAEHEAPCSADSPKPPDVPLYRLAYLNKPEIPVLLIGTLFAVANAAIFPAFGLLLSEMINTFYEPADKLSKDSKFWALIFVALGVASLLVIPAKFYFFAVAGGKLIRRIRLMCFEKIIHMEVSWFDESEHSSGVLGARLSTDAASVRALVGDAFVLLVQNIATAVISLVIALEACWQLALIILAMLPLLVLNGYAQFKVIEGFSADAKKLYEEASQVANDAVGSIRTVASFCAEEKVMELYHRRCEGPIKAGIRRGILSGTGFGLSFFLLFSVYACSFYAAARLVQDGKSSFSDVFRVFFALTIAAFGISQFSSLAPDSSKAKSSVGSIFAIIDGESKIDPSDASGLTLEHLMGEIEFHHVSFKYPTRPDFQVFRDLTLSIRPGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGIEIQRLQVKWLRQQMGLVSQEPMLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDQIMVERTTVIVAHRLSTVKSADLIAVIKNGVIEEKGKHESLLNKGGAYASLAALHTTSSSINELN 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01852 1296 Gene3D - 1039 1293 IPR027417 -
Accr8g01852 1296 Pfam ABC transporter 406 554 IPR003439 GO:0005524
Accr8g01852 1296 MobiDBLite consensus disorder prediction 637 676 - -
Accr8g01852 1296 FunFam ABC transporter B family member 1 706 1014 - -
Accr8g01852 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 625 IPR027417 -
Accr8g01852 1296 MobiDBLite consensus disorder prediction 626 676 - -
Accr8g01852 1296 FunFam ABC transporter B family member 1 1038 1287 - -
Accr8g01852 1296 MobiDBLite consensus disorder prediction 22 40 - -
Accr8g01852 1296 Gene3D ABC transporter type 1, transmembrane domain 110 1021 IPR036640 GO:0005524|GO:0016020
Accr8g01852 1296 CDD ABC_6TM_Pgp_ABCB1_D1_like 64 348 - -
Accr8g01852 1296 SUPERFAMILY ABC transporter transmembrane region 714 1028 IPR036640 GO:0005524|GO:0016020
Accr8g01852 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 387 623 IPR003439 GO:0005524
Accr8g01852 1296 FunFam ABC transporter B family member 9 51 382 - -
Accr8g01852 1296 CDD ABC_MTABC3_MDL1_MDL2 1048 1283 - -
Accr8g01852 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 65 352 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g01852 1296 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1048 1285 IPR003439 GO:0005524
Accr8g01852 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1039 1284 IPR027417 -
Accr8g01852 1296 CDD ABC_6TM_Pgp_ABCB1_D2_like 716 1031 - -
Accr8g01852 1296 ProSitePatterns ABC transporters family signature. 1188 1202 IPR017871 GO:0005524|GO:0016887
Accr8g01852 1296 Gene3D - 385 649 IPR027417 -
Accr8g01852 1296 PANTHER ABC TRANSPORTER B FAMILY 27 627 IPR039421 -
Accr8g01852 1296 FunFam ABC transporter B family member 1 377 626 - -
Accr8g01852 1296 Pfam ABC transporter 1067 1216 IPR003439 GO:0005524
Accr8g01852 1296 SUPERFAMILY ABC transporter transmembrane region 45 367 IPR036640 GO:0005524|GO:0016020
Accr8g01852 1296 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Accr8g01852 1296 CDD ABC_MTABC3_MDL1_MDL2 387 625 - -
Accr8g01852 1296 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 1013 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g01852 1296 Pfam ABC transporter transmembrane region 64 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g01852 1296 Pfam ABC transporter transmembrane region 726 998 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr8g01852 1296 SMART AAA_5 414 600 IPR003593 GO:0016887
Accr8g01852 1296 SMART AAA_5 1075 1269 IPR003593 GO:0016887
Accr8g01852 1296 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01852 Accr-Chr8 41395135 41402563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01852 40 633 Calmodulin-binding Proteins AT2G36910 36.516 2.37e-112 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01852 K05658 - gmx:100800293 1842.78