Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01849 ATGGTGATCGTGAACCTTGGTAACAAGAACAACAATCAAGAGAAGCAAGGACAGGGAATGCGACTTGGGAAATACGAGCTTGGTAAGACTCTAGGAGAAGGCAATTTCGGAAAAGTCAAATTAGCTAGGAACACCGATTCCGGCCAATCCTTTGCGGTTAAGATCCTCGAGAAGAAAAGGATCACTGACCTCAATATAACCAATCAGATTAAGAGGGAGATAGCCACCTTGAAGCTCTTGAAGCATCCGAACGTGGTCAGATTATACGAGGTCTTGGCTAGCAAGACAAAGATTTATATGGTCCTAGAGTACGTGACTGGAGGAGAATTGTTTGACAGGATCGCATCTAAAGGCAAACTTCCAGAAGCTGAAGGAAGGAAGCTTTTCCAGCAGTTGATTGACGGTGTTAGCTACTGTCATGATAAAGGGGTCTTCCACAGAGATCTTAAGCTGGAGAATGTACTTGTCCATGCGAAAGGGAACATAAAGATATCCGATTTTGGCCTAAGTGCTTTACCCCAGCATTTTAGAGCAGATGGTTTGCTGCATACCACCTGTGGAAGTCCCAACTATGTGGCCCCTGAGATTCTTTCTAATAAAGGATATGACGGCGCAACATCAGATATATGGTCCTGTGGGGTCATCTTGTATGTTATCTTAACAGGATATCTTCCTTTTGATGATCGGAATCTTGCAGTTCTCTACCAAAAGATTCTTAAGGGAGATGTTCAGATGCCAAAATGGCTATCGCCTGGTGCCAAAAACATCATAAAGAGGATTCTTGATCCCAACCCTGCTACTCGGATAACAATGGCTGGCATAAAACAAGATGAATGGTTCAAGCAGGACTATATTCCAGCAAAGCCAGAGGATGAGGAAGAGGATGTATATATTGACGATCAAGCCTTTTCCATCCACGAAGTGGCTCACGAAACAGGAGATAGGAGTCCAGGATCATCACCCCTTATCAATGCATTTCAATTGATAGGGATGTCTTCATGCCTTGACCTCTCTGGCTTCTTCGAAAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACGTCCAACCTCTGCGCAAAGGACTTGATTGAGAGGCTTGAGGACATTGTGACAGAAATGGGATTTGAAGTTCAAAAGAAAAATGGAAAAGTGAAAGTGATACAAGCGAACAAGGAGGCACGTAAAAGTCTAGGCAACCTCACAGTTGCAGCAGAGGTTTTTGAGATAAGCCCATCCTTGTATGTAGTAGAGTTAAGGAAATCCTATGGAGATTCTTCTGTATATAGAAAGTTGTGCGAGAAGTTGTCAAACGATTTGGGGGTTCCGCCAAGAACCGGAGCACTCGTAGATGGATAG 1356 0.4358 MVIVNLGNKNNNQEKQGQGMRLGKYELGKTLGEGNFGKVKLARNTDSGQSFAVKILEKKRITDLNITNQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFDRIASKGKLPEAEGRKLFQQLIDGVSYCHDKGVFHRDLKLENVLVHAKGNIKISDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYDGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQKILKGDVQMPKWLSPGAKNIIKRILDPNPATRITMAGIKQDEWFKQDYIPAKPEDEEEDVYIDDQAFSIHEVAHETGDRSPGSSPLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLCAKDLIERLEDIVTEMGFEVQKKNGKVKVIQANKEARKSLGNLTVAAEVFEISPSLYVVELRKSYGDSSVYRKLCEKLSNDLGVPPRTGALVDG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01849 451 Pfam NAF domain 323 379 IPR004041 GO:0007165
Accr8g01849 451 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Accr8g01849 451 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01849 451 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Accr8g01849 451 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Accr8g01849 451 Gene3D Kinase associated domain 1, KA1 324 441 - -
Accr8g01849 451 FunFam Non-specific serine/threonine protein kinase 18 320 - -
Accr8g01849 451 CDD CIPK_C 324 436 - -
Accr8g01849 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Accr8g01849 451 SUPERFAMILY Protein kinase-like (PK-like) 22 317 IPR011009 -
Accr8g01849 451 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01849 451 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01849 451 FunFam Non-specific serine/threonine protein kinase 320 442 - -
Accr8g01849 451 Gene3D Transferase(Phosphotransferase) domain 1 16 323 - -
Accr8g01849 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01849 Accr-Chr8 41343317 41347985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01849 88 440 CBL-interacting serine-threonine protein kinases AT3G17510 71.751 2.40e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr8g01849 Pkinase 7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01849 K07198 - qsa:O6P43_003749 721.079