Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01839 ATGGGTTGCTTTGGCTGTTGTGAAGACAATGATGTTCATACACGTACTGACAATAAAACCTTCATGCAAAACAATGCTGCAGGGAGATCTGGCAATCTTGGAAGAGAGGCTGTTGCAAGAAGCACTCCACCTACTGTACATTTTCAACCTATTGCTGTCCCTTCCCTTTCAATTGATGAATTAAAGTCTGTGACCGATAATTTTGGCACAAAATCTTTCATTGGTGAGGGAGCGTATGGCAAAGTATATCATGCCATATTGAGAAATGGCCGTGCCGTGGCTATAAAGAAGTTGGACTCTAGTAAGCAACCAGAACAAGAGTTTCTTGCGCAGGTCTCTATTGTATCAAGGTTAAGGCATGAAAATGTTATTGAACTTGTCGGTTATTGTGTTGAGGGTCCTTTTCGCGCCCTAGCCCACGAGTATGCTCCTAAAGGATCACTTCATGACATCCTGCATGGACGCAAAGGTGAAAAGGATGCACGTCCTGGTCCGGTTCTGTCTTGGGCAAGGAGAGTTAAAATTGCTGTTGGAGCAGCTAAAGGACTAGAATATCTTCATGAGAAAGCAGAAAAACATATCATCCATCGCTACATCAAGTCTAGCAGTATACTGATTTTTGATGATGATGTTTCGAAGATTGCTGATTTTGATCTGTCAAATCAGGCCCCCGATGAAGTAGCTCGTGTCCATTCTACTCGTGTTCTTGGAACCTTCGGTTACTATGCTCCAGAATTTGCAATGACCGGAGATCTCACTATAAAGAGTGATGTTTATAGTTTTGGAGTGGTATTGTTGGAACTATTAACAGGGCGTAAGCCTGTTGATCATACACTGCCGCGAGGGCAACAGAGCCTAGTGACTTGGGCAACACCAAAACTTAGTGAAGATAAGGTAAAGCAGTGTGTGGATGCCAGATTACAGGATGACTACCCTCCAAAAGCAGTTGCCAAGATGGCTGCTGTAGCTGCATTGTGTCTGCAATATGAAGCAGGGTTAAGGCCAAACATGAGCATTGTAGTTAAAGCTATGCAACCTCTGCTAAATCCTCGTCCTGCTCAGCCAAAAGAAAAATATTGA 1080 0.4343 MGCFGCCEDNDVHTRTDNKTFMQNNAAGRSGNLGREAVARSTPPTVHFQPIAVPSLSIDELKSVTDNFGTKSFIGEGAYGKVYHAILRNGRAVAIKKLDSSKQPEQEFLAQVSIVSRLRHENVIELVGYCVEGPFRALAHEYAPKGSLHDILHGRKGEKDARPGPVLSWARRVKIAVGAAKGLEYLHEKAEKHIIHRYIKSSSILIFDDDVSKIADFDLSNQAPDEVARVHSTRVLGTFGYYAPEFAMTGDLTIKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDARLQDDYPPKAVAKMAAVAALCLQYEAGLRPNMSIVVKAMQPLLNPRPAQPKEKY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01839 359 PIRSF ILK 15 354 - -
Accr8g01839 359 Pfam Protein tyrosine and serine/threonine kinase 72 342 IPR001245 GO:0004672|GO:0006468
Accr8g01839 359 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 353 - -
Accr8g01839 359 Gene3D Phosphorylase Kinase; domain 1 33 142 - -
Accr8g01839 359 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Accr8g01839 359 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01839 359 FunFam pto-interacting protein 1 144 355 - -
Accr8g01839 359 SUPERFAMILY Protein kinase-like (PK-like) 44 343 IPR011009 -
Accr8g01839 359 Gene3D Transferase(Phosphotransferase) domain 1 144 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01839 Accr-Chr8 41223194 41225627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01839 49 345 Receptor kinase-like Gene Family AT4G02010 47.508 2.41e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Accr8g01839 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01839 K13436 - gmx:547596 552.362