Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01796 ATGATTGTGGACCAGAAGATGGTGAACAAAGAAATTGTCCGTCAGCAAACTATTCCTGTGTTAGACGTGGAGTATCATCTTCGTGTAGCACAAGAACACAACGTCAAGTTGGAGGTTTCGCCGAGATCTTCTTCTGTTCCGATCTTTGGCCAAGTTCGGGTTTCTTCTGAAACAATTTCTACTGAAACGTCCCGCTTTGAAACGGCTGAGAGTTGTTCTGAGATAATTGAGGATCCCATCATAGAGACCTCTTCATCTAAGTTCATCCCAAATGTTCGATCTGGTAGCCATGCTGATATTGGAAGCCGGCAATCTATGGAGGACGAACACATTAAAATAGATGATCTCGCTTCCCATCTTGGACTGGTGTTCAAATCTCCAATACCGTGTGCATTTTATGCAGTTTTTGACGGCCATGAAGGGTCTGAGGCAGCCAATTTTGTCAAGAGGAATGCTATGAGACTATTTTTTGAAGATGCTAATCTGCTGCTGTCATATGATACTGATGTATTATTTCTAAAGAAATTGGAGGATTCCCATCGGAAGGCTTTCTTACTCGCAGATCTCGCCTTGGCTAACGAAGCCACTGTTGGTAGTTCATGTGGGACAACAGCATTGACTGCACTTGTACTTGGAAGTCATTTACTGGTTGCAAATGCTGGTGATTGTCGGGCAGTTCTTTGCAGGAGAGGAGTTGCTGTTAACTTGTCTCAAGATCATAAAGCGGGTAATTTACGAGAAGAGAGAAGGGTGAAAGACTTACGTGGCTTCATTGATGATAATGGCTATCTCAGTGGTTATCTGTCTGTGACCCGAGCCCTTGGGGATTGGCATTTAAAACTTCCACTTGGTTCTGCTTCACCTCTTATTGCTGACCCAGATGTTCGACAGGTTTCATTGACTGAGGATGATGAGTTTTTGATCATTGCGTGTGATGGGATTTGGGATGTGATGTCAAGTGAGGATGCAGTTAGATTTGTTCGCCGTAGGTTGAGATGGCATGATGATCCACAGCGATGTGCTAGAGAGCTGGTCAAGGAAGCACTGCGCTTGAATACATCAGATAATCTCACTGTGATTGTTATATGCTTGTCCTCCATTGAAAGTATCGTTGAATCAATTCCACCCCAAAGGCGAAGATTCAGAGCTTGTTCTCTTTCCGAGAGGCTCGTAACATATTGA 1182 0.4382 MIVDQKMVNKEIVRQQTIPVLDVEYHLRVAQEHNVKLEVSPRSSSVPIFGQVRVSSETISTETSRFETAESCSEIIEDPIIETSSSKFIPNVRSGSHADIGSRQSMEDEHIKIDDLASHLGLVFKSPIPCAFYAVFDGHEGSEAANFVKRNAMRLFFEDANLLLSYDTDVLFLKKLEDSHRKAFLLADLALANEATVGSSCGTTALTALVLGSHLLVANAGDCRAVLCRRGVAVNLSQDHKAGNLREERRVKDLRGFIDDNGYLSGYLSVTRALGDWHLKLPLGSASPLIADPDVRQVSLTEDDEFLIIACDGIWDVMSSEDAVRFVRRRLRWHDDPQRCARELVKEALRLNTSDNLTVIVICLSSIESIVESIPPQRRRFRACSLSERLVTY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01796 393 Gene3D - 78 369 IPR036457 -
Accr8g01796 393 SUPERFAMILY PP2C-like 84 365 IPR036457 -
Accr8g01796 393 SMART PP2C_SIG_2 108 364 IPR001932 -
Accr8g01796 393 ProSiteProfiles PPM-type phosphatase domain profile. 93 364 IPR001932 -
Accr8g01796 393 CDD PP2Cc 92 364 IPR001932 -
Accr8g01796 393 SMART PP2C_4 83 362 IPR001932 -
Accr8g01796 393 PANTHER PROTEIN PHOSPHATASE 2C 77 362 IPR015655 GO:0004722|GO:0006470
Accr8g01796 393 FunFam Probable protein phosphatase 2C 22 78 367 - -
Accr8g01796 393 Pfam Protein phosphatase 2C 95 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01796 Accr-Chr8 40341214 40342981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01796 1 384 PP2C-type Phosphatase Gene Family AT1G48040 55.039 2.55e-134 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01796 K14803 - gmx:100798957 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01796 8 40341214 40342981 Accr8g01796 8 40341214 40342981 ECH