Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01703 ATGGCAAATAACTTAACGGGCCAGCTCGTTGGTTCAGAGATACATGGATTCCATACATTGCAAGAGCTGGATGTTGAGAACACTATGGAGGAAGCAAAAAGCAGATGGCTTCGCCCAAATGAGATTCAAGCTATACTTAGTAATTACAAGTATTTCCCCATCCATGTAAAGCCAGTGCATTTGCCTCCAAGTGGTACTATTGTTTTATTCGACCGCAAGATGCTTAGGAACTTTCGAAAAGATGGTTACAACTGGAAAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAACACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACACAGCCTGGATAAGCCAAAATTTGTGCGTAGATGTTATTGGCTTCTTGACAAGAGTTTGGAACACATAGTTCTTGTTCATTATCGTGAAACACAAGAGTTGCAGGGCTCTCCAGCTACACCTGTAAATTCAAATTCAAGTTCGGGCTCTGATCCAGTTGTGCCGTTGATTTTATCAGAAGAATCGGATTCTGGGACCAAAAATCCATATGCTGGTGAAGTTAATGACAATTTGAAACTCAAGAGTCATGAACTGAGGCTTCTTGAGCTCAACACACTTGAATGGGATGATTTAGTGGTTACAAATGACCTCAGCAAATCTACCACATCTATTGGAGACAAGGTTCCATGTTTTGATCAACAAAATCAATCTTTGCTGAATGGCAATTTAAGCAACGTTACTAGCAGCCTGTCTGCTGAAATTCCTTCTTTTGAAAACATAACACAACCGATTACTGGGAGCAGCAGTACACCTTATGGTTTCCCAGAAGCTGTAAATCTTCAGACAACGGATACTCAAGCAAATCCGAAAGCACAAAAGGGATATTCTGTCTCTGTGAGTGGTGTTGATTCTTTGGACACTTTGGTTGATGACACTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATCAACCGCATGATGTCTGATTCACAATGTTCTGTAGATGAATCAGCTCTTGTATCACCTGTTATATCTATTCAAGAACCATATTCTTCTTTGGTAGAGGATCATCAGCAACCTTCTCTGCCTGAACGGCTTTTTAATATCACGGACGTCTCACCTTCATGGGCATCTTCCACTGAGAAGACCAAGATCCTGGTCACTGGAATCTTCCATGATAACTATCTACATCTTGGAAAGTCCAATCTATTTTGTGTCTGTGGTGATGTAAGTGTTCAAGCTGAAATTGTTCAAGTTGGGGTCTACCGATGCTGGGTATCATCACATTCCCCAGGATTCGTAAATCTCTATATGAGCCTTGATGGCCATAAGCCCATAAGCCAGGTTGTCAATTTTGAGTTTCGTACTCCAGTTTTGCATGACCCCACACCCTCTATAGAAGAAAAGTACAATTGGGCTGAGTTTCGACTTCAAATGAGGCTTGCTTGTTTGCTCTTTAGCACTCATAAGAGTCTTGATATTATCTCTACTAAAGTATCACCTAATGCAATAAAAGAGGCTAAAAACTTTGCTTCAAAGACCTCACTGGTTTTCAAAAGTTGGCAATACTTGGAAAAGTCAACTGAAGAGAACAAAACTTCATTTCCTCGAGCAAAGGATGCACTGCTTGAAACCTCCTTGAAAAATGGATTAAAGGAATGGCTATTAGAAAGAATACTCTTGGGCCGTAAGACTACAGAATATGATTCCCAAGGTCAAGGTGTAATCCATTTGTGCGCAATTCTGGGATATAGTTGGGCTATTTCGTTATTTTCAGGATCAGGCTTGTCCCTAGATTTTCGAGATAAATTGGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAATATGGTTGCATTGCTGCTGTCTGCTGGGGCAAAGCCTAACTTAGTCACAGATCCTACTCCACAGAATCCTGGTGGATGTACCGCCGCTGATCTTGCTTATATGAAGGGTTATGAGGGCTTAGCAGCTTATCTTTCGGAAAAATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATTAGTGGCAAACTGGAAACAAGCACAAATGATCCAGTAGAGTATGAGAATCTTACTGAGGACCAACTATACCTAAAGGATACATTGGCAGCTTACCGAACAACTGCTGAGGCGGCAGCACGAATACAGGCTGCATATAGGGAGCACTCACTAAAAGTACAAGCAATGGCAATTCAGAGTTTAACTCCAGAGGATGAGGCCCGCATGATTGTTGCAGCATTGAAGATTCAACATGCCTACCGCAACTATAACACAAGGAGGATGATGGCAGCTGCAGCTCGCATCCAGCATAGATTCCGTACATGGAAATTGCGTAAAGAATTTCTCAACATGCGACGTCAGGCTATCATAATCCAAGCTGCTTTCCGGGGCTACCAAGTGAGGAGGCAGTATCGTAAAATTCTCTGGTCTGTTGGAATACTTGAAAAAGCAATCCTGCGATGGCGACTGAAGAGAAAAGGCTTTCGTGGACTTCAGGTTAACCCTGTCCAACAAGAGCAAGAACCAAAGCAGGAAAGCGACGCAGAGGAGGACTTCTTCCGGACTGGTCGGAAACAAGCAGAAGAACGCGTGGAGAGATCTGTAGTACGTGTTCAGGCCATGTTCCGTTCTAAGCAAGCACAAGAAGAGTATAGGAGGATGAAACTGGCTCACAGTCAGGCAAAGTTGGAACTTGAACTTGAAGAGCTGCTCAATTCAGAGGTTGATATGTTATAG 2760 0.4257 MANNLTGQLVGSEIHGFHTLQELDVENTMEEAKSRWLRPNEIQAILSNYKYFPIHVKPVHLPPSGTIVLFDRKMLRNFRKDGYNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHSLDKPKFVRRCYWLLDKSLEHIVLVHYRETQELQGSPATPVNSNSSSGSDPVVPLILSEESDSGTKNPYAGEVNDNLKLKSHELRLLELNTLEWDDLVVTNDLSKSTTSIGDKVPCFDQQNQSLLNGNLSNVTSSLSAEIPSFENITQPITGSSSTPYGFPEAVNLQTTDTQANPKAQKGYSVSVSGVDSLDTLVDDTLQSQDSFGRWINRMMSDSQCSVDESALVSPVISIQEPYSSLVEDHQQPSLPERLFNITDVSPSWASSTEKTKILVTGIFHDNYLHLGKSNLFCVCGDVSVQAEIVQVGVYRCWVSSHSPGFVNLYMSLDGHKPISQVVNFEFRTPVLHDPTPSIEEKYNWAEFRLQMRLACLLFSTHKSLDIISTKVSPNAIKEAKNFASKTSLVFKSWQYLEKSTEENKTSFPRAKDALLETSLKNGLKEWLLERILLGRKTTEYDSQGQGVIHLCAILGYSWAISLFSGSGLSLDFRDKLGWTALHWAAYCGRENMVALLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGYEGLAAYLSEKSLVEQFNDMSLAGNISGKLETSTNDPVEYENLTEDQLYLKDTLAAYRTTAEAAARIQAAYREHSLKVQAMAIQSLTPEDEARMIVAALKIQHAYRNYNTRRMMAAAARIQHRFRTWKLRKEFLNMRRQAIIIQAAFRGYQVRRQYRKILWSVGILEKAILRWRLKRKGFRGLQVNPVQQEQEPKQESDAEEDFFRTGRKQAEERVERSVVRVQAMFRSKQAQEEYRRMKLAHSQAKLELELEELLNSEVDML 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01703 919 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Accr8g01703 919 ProSiteProfiles IQ motif profile. 753 779 IPR000048 GO:0005515
Accr8g01703 919 FunFam Calmodulin-binding transcription activator 2 768 816 - -
Accr8g01703 919 Pfam Ankyrin repeats (3 copies) 559 634 IPR002110 GO:0005515
Accr8g01703 919 ProSiteProfiles IQ motif profile. 769 795 IPR000048 GO:0005515
Accr8g01703 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Accr8g01703 919 SUPERFAMILY Ankyrin repeat 546 667 IPR036770 -
Accr8g01703 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 819 IPR027417 -
Accr8g01703 919 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Accr8g01703 919 Gene3D - 768 816 - -
Accr8g01703 919 SMART iq_5 791 813 IPR000048 GO:0005515
Accr8g01703 919 SMART iq_5 871 893 IPR000048 GO:0005515
Accr8g01703 919 SMART iq_5 768 790 IPR000048 GO:0005515
Accr8g01703 919 SMART iq_5 715 737 IPR000048 GO:0005515
Accr8g01703 919 MobiDBLite consensus disorder prediction 148 169 - -
Accr8g01703 919 Pfam IQ calmodulin-binding motif 794 813 IPR000048 GO:0005515
Accr8g01703 919 Gene3D Immunoglobulins 364 459 IPR013783 -
Accr8g01703 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Accr8g01703 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Accr8g01703 919 Gene3D - 533 674 IPR036770 -
Accr8g01703 919 SMART CG_1_2 29 146 IPR005559 GO:0003677
Accr8g01703 919 FunFam Calmodulin-binding transcription activator 5 364 460 - -
Accr8g01703 919 Coils Coil 885 905 - -
Accr8g01703 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 901 - -
Accr8g01703 919 SMART ANK_2a 644 675 IPR002110 GO:0005515
Accr8g01703 919 SMART ANK_2a 605 634 IPR002110 GO:0005515
Accr8g01703 919 MobiDBLite consensus disorder prediction 148 167 - -
Accr8g01703 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Accr8g01703 919 SUPERFAMILY E set domains 369 456 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01703 Accr-Chr8 39269542 39278694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01703 29 905 CAMTA Transcription Factor Family AT3G16940 55.631 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Accr8g01703 CG-1 7.4e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01703 K21596 - gmx:100793970 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01703 8 39269542 39278694 Accr8g01703 8 39269542 39278694 ECH