Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01682 ATGGATCCGAGTAGGAAAGGATCGGAAGCAGAGGACGCTAATGCGAGGAATCCAAATGGGGCTTCGCCGGAAGAGAGTCCGACAATGAGCGAGCAGAAGAAAACTTGTGCCGATTGCGGCACCACCAAGACCCCTCTCTGGCGTGGCGGTCCAGCTGGGCCGAAGTCACTGTGCAACGCTTGTGGAATCAAAAGCAGGAAGAAGAAGAGAGCGATTCTGGGTTTGAAAGGGAAGAGAAGCAATAGTAACAGCAATGGAAGCAGCAAGATTGGGGATAGTTTGAAGCATAGGTTAATGGCTTTGGGAAGGGAGGTTTTGATGCGGAGATCAACGGCGGAGAGGCAGAGGAAGAAGTTGGGAGAGGAAGAACAAGCAGCAGTTCTATTAATGGCTCTCTCATATGGATCAGTTTATGCTTAG 420 0.5048 MDPSRKGSEAEDANARNPNGASPEESPTMSEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIKSRKKKRAILGLKGKRSNSNSNGSSKIGDSLKHRLMALGREVLMRRSTAERQRKKLGEEEQAAVLLMALSYGSVYA 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01682 139 MobiDBLite consensus disorder prediction 19 39 - -
Accr8g01682 139 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
Accr8g01682 139 PANTHER OS01G0976800 PROTEIN 6 139 - -
Accr8g01682 139 SMART GATA_3 30 88 IPR000679 GO:0006355|GO:0043565
Accr8g01682 139 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Accr8g01682 139 MobiDBLite consensus disorder prediction 1 54 - -
Accr8g01682 139 MobiDBLite consensus disorder prediction 77 91 - -
Accr8g01682 139 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Accr8g01682 139 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Accr8g01682 139 MobiDBLite consensus disorder prediction 74 94 - -
Accr8g01682 139 Gene3D - 28 72 IPR013088 GO:0006355|GO:0008270
Accr8g01682 139 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 32 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01682 Accr-Chr8 38993921 38994535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01682 1 139 C2C2-Gata Transcription Factor Family AT3G06740 56.081 1.63e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr8g01682 GATA 9.1e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01682 - - qsa:O6P43_021814 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01682 8 38993921 38994535 Accr8g01682 8 38993921 38994535 ECH