Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01644 ATGTGTGGAGGTGCTATCATTTCCGACTTCGTTTCCGTCAAGCGAGGCCGGAACCTCACCGCCAGCGACCTTTGGTCTGAGCTCGACCCTTTCTCCGACCTCCTTGGCTTCGATACTAACGCCGCTTCTGCCAAAAGCCAACCGCCTCAGAAACTCCCTCAAGTCCCCATCAATAAAGGGGCGTGTGATGAGAAGGAGAAGAAAAGCGTGAGCGCAGGGAAAGCTGGCGGGACGAAGAGCACTGGTCAGAGAGCACGCAAGAACGTGTACAGAGGAATAAGGCAGAGGCCATGGGGCAAGTGGGCCGCAGAGATAAGGGACCCACACAAGGGCGTCCGAGTTTGGCTTGGCACCTACAACACCGCCGAGGAAGCCGCTAGGGCCTACGACGAGGCCGCCAAGCGCATCCGCGGTGACAAGGCCAAGCTCAACTTCCCCGCCGCACCACAAGAGCCACCCACCAAGAAGCGCTGCCTGAGCCCAGAGGTGAGCGAGGGGAGCAGCCACCAGACGGGGCCACCGACGCCGTATCAGGCGGATCTGGAGCTGAAGCAGCACATATCAGACCTGGAGTCGCTGCTGGGGCTGGAGCCGGAGGCAGAGATGAGCGATCAGCAGCAGGCGGTGAGTGGGGCAGGGAGCTGTGACGGCGGCGATTGGGCGGAGTCGGTGGACCTGTGGATGCTGGAGGACGTCATGATGAATCAGATGGCAAGCAGTGAGCTGTTGTACTAA 735 0.6054 MCGGAIISDFVSVKRGRNLTASDLWSELDPFSDLLGFDTNAASAKSQPPQKLPQVPINKGACDEKEKKSVSAGKAGGTKSTGQRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTYNTAEEAARAYDEAAKRIRGDKAKLNFPAAPQEPPTKKRCLSPEVSEGSSHQTGPPTPYQADLELKQHISDLESLLGLEPEAEMSDQQQAVSGAGSCDGGDWAESVDLWMLEDVMMNQMASSELLY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01644 244 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700|GO:0006355
Accr8g01644 244 MobiDBLite consensus disorder prediction 144 174 - -
Accr8g01644 244 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Accr8g01644 244 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 CDD AP2 90 148 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 MobiDBLite consensus disorder prediction 42 86 - -
Accr8g01644 244 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Accr8g01644 244 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Accr8g01644 244 PANTHER DNA-BINDING DOMAIN 54 185 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01644 Accr-Chr8 38601026 38602602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01644 1 233 AP2-EREBP Transcription Factor Family AT3G16770 43.223 6.77e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01644 AP2 2.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01644 K09286 - gmx:100779626 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01644 8 38601026 38602602 Accr8g01644 8 38601026 38602602 ECH