Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01643 ATGGTTGGGGATATCTTCGGCAAGAGCTGGGGATCGACTCAGCCTTCGGCTACGAAATCGAGTATCGGAACTATTAACAAAGATCAGAATCTCTTTGGAGATTTGGTCGGCTCTGCTTTAGGGCAGAGTTCTAAGAGTAGTAGCAGCAATGTTCCCCTGAAAAATGCTACACCTATTTCAAAGGCATCCAGTACTGCATCCAACCAGAGTTCATTTTCCATGGGGAACATGGCTGATTCTTTGCCTAAAAATAGAAGTACAGTTCAAAGCAATGGAAGTTGGGGATATTCTGGGAATACAGGGAGCTATTCCAGCGGCTACAATAGTAATAGTACTATGAGCTCCAATAGAAGCACCAATCTAGGGGGTCCTTCATTGCGCAGTGTGAATGCTGGAGGTGGTGTAGCTGGTAGTGGAATGAGTTCTAATAAAGATCCATTTGGTTCTTTGTCTGGTTTTGGATCCAAACAGTCTAGTAGTCTTAATTCAGCCAGCAAAGCAAAAGAGAATGATACAGGGGATGATGGTTTTGGACATTTTCAGAATGCTTCTAAACCAAGCTCTACTACATTCCCGTCAAGTAGTTCAACAGCAAATAATATCAATCTTAATGGATCTGCATCTTTGAGCCAGAAACCTGTGCAAACTTCTGGTAGTGATCCATTGGACATGTTCTTCACGAGTTCCTCGGCCGCATCTGGAAGTGCTTCTGTGGCCTCTGAAGGATTTGGAGGACAGCCTTCTTCAGAAGTTGATGATTGGGGCATAGATTCTGAATTTGGTGGGGGAGGCCATGATGTGGGTGGAACAACCACTGAGCTTGAAGGACTTCCCCCTCCTCCTGCTGGTGTATCTGGTTCTGCAGCAAAAAGCAAGGGGCTGGAAAATTACAAGCAGGGACAATATGCTGATGCCATAAAGTGGCTTTCCTGGGCTACTATCCTTCTTGAGAAATCAGGTGATAACGCAGGCACTGCGGAAGTTTTGTCATGCAGGGCTTCATGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTAGCAGATTGTACAAAGGTGCTTGAGAACGATGAAACAAATGTATCCATTCTTGTACAACGTGCTCTTTTATATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAGGACCTGAGAACTGTTCTGAAGATTGATCCTAGTAATAGGGTTGCAAGAAGTACCATCCACCGATTGAATAAGATGGCTGATTAG 1227 0.4434 MVGDIFGKSWGSTQPSATKSSIGTINKDQNLFGDLVGSALGQSSKSSSSNVPLKNATPISKASSTASNQSSFSMGNMADSLPKNRSTVQSNGSWGYSGNTGSYSSGYNSNSTMSSNRSTNLGGPSLRSVNAGGGVAGSGMSSNKDPFGSLSGFGSKQSSSLNSASKAKENDTGDDGFGHFQNASKPSSTTFPSSSSTANNINLNGSASLSQKPVQTSGSDPLDMFFTSSSAASGSASVASEGFGGQPSSEVDDWGIDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSAAKSKGLENYKQGQYADAIKWLSWATILLEKSGDNAGTAEVLSCRASCFKEVGEYKKAVADCTKVLENDETNVSILVQRALLYESMEKYRLGAEDLRTVLKIDPSNRVARSTIHRLNKMAD 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01643 408 MobiDBLite consensus disorder prediction 37 95 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 236 289 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 142 167 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 9 24 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 107 222 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 107 126 - -
Accr8g01643 408 SMART tpr_5 286 319 IPR019734 GO:0005515
Accr8g01643 408 SMART tpr_5 326 359 IPR019734 GO:0005515
Accr8g01643 408 SMART tpr_5 360 393 IPR019734 GO:0005515
Accr8g01643 408 MobiDBLite consensus disorder prediction 181 222 - -
Accr8g01643 408 SUPERFAMILY TPR-like 288 401 IPR011990 GO:0005515
Accr8g01643 408 Gene3D Tetratricopeptide repeat domain 286 407 IPR011990 GO:0005515
Accr8g01643 408 PANTHER OS03G0340700 PROTEIN 1 408 - -
Accr8g01643 408 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01643 Accr-Chr8 38589513 38591187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01643 301 405 Calmodulin-binding Proteins AT3G25230 33.333 1.72e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01643 - - pcin:129293443 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01643 8 38589513 38591187 Accr8g01643 8 38589513 38591187 ECH