Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01642 ATGAATTCGAATTATGGCAAACCCAACCAGCAGAAAGGATCTGCAGCCTCTCTGAACAACTTCAATTTCGACTTTGATCTCGGGATCGGATCGGATCGACCCAAATCTCTCAACGATCAGAAAAACCATACCACGTCCAATTCATATTTTACTTCTTCCTCCACATTCCCGTCTACTCAACCAAGACCCTCCTGGCAACCAGGCAAACCATCATGGACTCAACAGCCGTCGCCCAGTCTGGCAGCTCAGCCCGCCTTGCCCGGTGGGCCCGTTTCAATGGTTGGGGATATCTTCGGCAAGAGCTGGGGATCGACTCAGCCTTCGGCTACGAAATCGAGTATCGGAACTATTAACAAAGATCAGAATCTCTTTGGAGATTTGGTCGGCTCTGCTTTAGGGCAGAGTTCTAAGAGTAGTAGCAGCAATGTTCCCCTGAAAAATGCTACACCTATTTCAAAGGCATCCAGTACTGCATCCAACCAGAGTTCATTTTCCATGGGGAACATGGCTGATTCTTTGCCTAAAAATAGAAGTACAGTTCAAAGCAATGGAAGTTGGGGATATTCTGGGAATACAGGGAGCTATTCCAGCGGCTACAATAGTAATAGTACTATGAGCTCCAATAGAAGCACCAATCTAGGGGGTCCTTCATTGCGCAGTGTGAATGCTGGAGGTGGTGTAGCTGGTAGTGGAATGAGTTCTAATAAAGATCCATTTGGTTCTTTGTCTGGTTTTGGATCCAAACAGTCTAGTAGTCTTAATTCAGCCAGCAAAGCAAAAGAGAATGATACAGGGGATGATGGTTTTGGACATTTTCAGAATGCTTCTAAACCAAGCTCTACTACATTCCCGTCAAGTAGTTCAACAGCAAATAATATCAATCTTAATGGATCTGCATCTTTGAGCCAGAAACCTGTGCAAACTTCTGGTAGTGATCCATTGGACATGTTCTTCACGAGTTCCTCGGCCGCATCTGGAAGTGCTTCTGTGGCCTCTGAAGGATTTGGAGGACAGCCTTCTTCAGAAGTTGATGATTGGGGCATAGATTCTGAATTTGGTGGGGGAGGCCATGATGTGGGTGGAACAACCACTGAGCTTGAAGGACTTCCCCCTCCTCCTGCTGGTGTATCTGGTTCTGCAGCAAAAAGCAAGGGGCTGGAAAATTACAAGCAGGGACAATATGCTGATGCCATAAAGTGGCTTTCCTGGGCTACTATCCTTCTTGAGAAATCAGGTGATAACGCAGGCACTGCGGAAGTTTTGTCATGCAGGGCTTCATGTTTCAAAGAAGTTGGGGAGTACAAGAAAGCAGTAGCAGATTGTACAAAGGTGCTTGAGAACGATGAAACAAATGTATCCATTCTTGTACAACGTGCTCTTTTATATGAGAGTATGGAAAAGTACAGACTTGGTGCTGAGGACCTGAGAACTGTTCTGAAGATTGATCCTAGTAATAGGGTTGCAAGAAGTACCATCCACCGATTGAATAAGATGGCTGATTAG 1503 0.4551 MNSNYGKPNQQKGSAASLNNFNFDFDLGIGSDRPKSLNDQKNHTTSNSYFTSSSTFPSTQPRPSWQPGKPSWTQQPSPSLAAQPALPGGPVSMVGDIFGKSWGSTQPSATKSSIGTINKDQNLFGDLVGSALGQSSKSSSSNVPLKNATPISKASSTASNQSSFSMGNMADSLPKNRSTVQSNGSWGYSGNTGSYSSGYNSNSTMSSNRSTNLGGPSLRSVNAGGGVAGSGMSSNKDPFGSLSGFGSKQSSSLNSASKAKENDTGDDGFGHFQNASKPSSTTFPSSSSTANNINLNGSASLSQKPVQTSGSDPLDMFFTSSSAASGSASVASEGFGGQPSSEVDDWGIDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSAAKSKGLENYKQGQYADAIKWLSWATILLEKSGDNAGTAEVLSCRASCFKEVGEYKKAVADCTKVLENDETNVSILVQRALLYESMEKYRLGAEDLRTVLKIDPSNRVARSTIHRLNKMAD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01642 500 MobiDBLite consensus disorder prediction 99 114 - -
Accr8g01642 500 SMART tpr_5 452 485 IPR019734 GO:0005515
Accr8g01642 500 SMART tpr_5 418 451 IPR019734 GO:0005515
Accr8g01642 500 SMART tpr_5 378 411 IPR019734 GO:0005515
Accr8g01642 500 MobiDBLite consensus disorder prediction 23 114 - -
Accr8g01642 500 MobiDBLite consensus disorder prediction 273 314 - -
Accr8g01642 500 PANTHER OS03G0340700 PROTEIN 1 500 - -
Accr8g01642 500 Gene3D Tetratricopeptide repeat domain 378 499 IPR011990 GO:0005515
Accr8g01642 500 MobiDBLite consensus disorder prediction 328 381 - -
Accr8g01642 500 MobiDBLite consensus disorder prediction 133 187 - -
Accr8g01642 500 MobiDBLite consensus disorder prediction 234 259 - -
Accr8g01642 500 MobiDBLite consensus disorder prediction 199 218 - -
Accr8g01642 500 MobiDBLite consensus disorder prediction 199 314 - -
Accr8g01642 500 SUPERFAMILY TPR-like 380 493 IPR011990 GO:0005515
Accr8g01642 500 MobiDBLite consensus disorder prediction 40 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01642 Accr-Chr8 38589237 38591187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01642 393 497 Calmodulin-binding Proteins AT3G25230 33.333 2.54e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01642 - - pcin:129293443 590.497