Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01631 ATGGGTAACGGTGACCATGAAAGAAAGAAGAGGATGGCTGTTATTTCGGTATCCGGAATCCTCCTAGTGGCCATGGTGGCCGCTGTAGGCGTTGGTCTATCCGGTGCTGGGGGCGGCGCCGCCGCAGGGGATCACAGTGAGAAAGATCAGATCTCTTCGTCTCAAAAGAATGTGGAAATGCTCTGCAGTTCAGCCCAATACAAAGAAACCTGCCAACACAGCCTCTCAAAAGCAAACAATAATGGCACCACGGACGTTAAAGAACTCATCAAAATCGCCTTCCACGCGGCGGCCAAGGAGTTCAAGAAGTTAATCAACAACTCCACCCTCTTCGAGGAGCTCGCCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCACGAGGTGCTAGACTACGCCATTGACGACATTAGACACTCGATCGACAGCGTGGAACAATTTGATATAAGTAAGCTCGGTCAATACGCCTATGACGTTAAAGTGTGGCTCGGAGGCACTATCTCCCATCAACAAACCTGCTTGGACGGCTTCGAGAACACCACCACTCACGCCGCCGAGACCATGGCCAAGGTGTTGAACACCTCTCTCGAGTTGAGCATGAACGCTTTGGACATTATTTCTGGCCTCTCTGACGTCGCCGACGCCTTCGGATTCACCACCATCTTCGGCAGCGCAGTGCAAGATAATGGCACTGTCAACACCACCAATGAGCAAGCTCATCACGGCAATGAAAGCACCTCCAGTCGGAAGCTTCTCCAGAGCTTGCCGTCGTGGGTAAGTGCTAGGCACCACCGTCACCACCTAGCCAGAGCCGCAGCCGGTGCCGCCCACGTTAAGCCCGATGTTGTTGTGGCTCAAGACGGAACTGGGCAATTCACAACTCTCACTGAGGCTCTTACAACTGTTCCAAAAATCAATAAGAAACCCTATGTAATTTACGTGAAGGCCGGCATATATAACGAGATTGTCAAGATCCCCAAGCAATCCAGTTACATCACTATCATCGGAGATGGTCCCACCTGCACCAGATTCACCGGCAATCTCAACTATGCCGACGGTGTCCAAACTTACAACACCGCAACATTCGCCGTGAATGCTCCTTACTTCACAGCCATGCACGTAGGGTTCGAGAACTCAGCCGGAGCAATGAAGCACCAAGCCGTGGCCCTCCGAGTAACAGCAGATAAAGCTGTCTTCTACAACTGCCATATGGACGGATACCAAGACACACTTTACGCCCAGTCTCACCGCCAGTTCTACCGCGACTGCCTCATCTCCGGCACAATCGACTTCATCTTTGGTGACGCCGACATGGTCTTCCAGAACTGCGCTTTGGTCGTCAGGCAGCCTTTAGGCAACCAGAACTCCATCGTCTCCGCCAGTGGCCGCAACGTGATCAACAGCCCTAGCGCCATGGTGTTCCAGAGCTGCCGCTTCATCGGCGACAAGCTCTACCTCTCGGACGCGAACAAGAAACCGGCATACCTCGGACGGCCATGGAGGGCCTATGCTAAGGTGGTTATCATGGATTCTCAGATCGACGGCATCTTCGCTCCCGAAGGTTACTTGTCATGGATGGGTAGCATCTATCACCTGACTTCCGTCTTCAATGAGTACAACAACAAAGGTCCGGGCGCCGATACATCTCACCGAGTGAAATGGCCCGGCGTGAAGACCATCACCGCCGTTCAAGCCGCAAATTTCTATCCTCGCAAGTTCTATGAATTCCACAATGCAACTACTTCTGAAGATGATTCTTGGATCTCTGCCTCTGGGATTCCCTACTCCACTGGTCCCATGTAA 1806 0.5244 MGNGDHERKKRMAVISVSGILLVAMVAAVGVGLSGAGGGAAAGDHSEKDQISSSQKNVEMLCSSAQYKETCQHSLSKANNNGTTDVKELIKIAFHAAAKEFKKLINNSTLFEELAKDNMTKQAMEICHEVLDYAIDDIRHSIDSVEQFDISKLGQYAYDVKVWLGGTISHQQTCLDGFENTTTHAAETMAKVLNTSLELSMNALDIISGLSDVADAFGFTTIFGSAVQDNGTVNTTNEQAHHGNESTSSRKLLQSLPSWVSARHHRHHLARAAAGAAHVKPDVVVAQDGTGQFTTLTEALTTVPKINKKPYVIYVKAGIYNEIVKIPKQSSYITIIGDGPTCTRFTGNLNYADGVQTYNTATFAVNAPYFTAMHVGFENSAGAMKHQAVALRVTADKAVFYNCHMDGYQDTLYAQSHRQFYRDCLISGTIDFIFGDADMVFQNCALVVRQPLGNQNSIVSASGRNVINSPSAMVFQSCRFIGDKLYLSDANKKPAYLGRPWRAYAKVVIMDSQIDGIFAPEGYLSWMGSIYHLTSVFNEYNNKGPGADTSHRVKWPGVKTITAVQAANFYPRKFYEFHNATTSEDDSWISASGIPYSTGPM 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01631 601 SUPERFAMILY Pectin lyase-like 279 598 IPR011050 -
Accr8g01631 601 ProSitePatterns Pectinesterase signature 2. 426 435 IPR033131 -
Accr8g01631 601 ProSitePatterns Pectinesterase signature 1. 307 326 IPR018040 -
Accr8g01631 601 NCBIfam pectinesterase inhibitor domain 54 210 IPR006501 GO:0004857
Accr8g01631 601 Pfam Pectinesterase 282 574 IPR000070 GO:0030599|GO:0042545
Accr8g01631 601 Gene3D - 276 599 IPR012334 -
Accr8g01631 601 PANTHER PECTINESTERASE 17 590 - -
Accr8g01631 601 CDD PMEI-like_3 61 211 - -
Accr8g01631 601 SMART PMEI_2 53 206 IPR006501 GO:0004857
Accr8g01631 601 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Accr8g01631 601 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Accr8g01631 601 FunFam Pectinesterase 4 279 600 - -
Accr8g01631 601 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 210 IPR035513 -
Accr8g01631 601 FunFam Pectinesterase 54 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01631 Accr-Chr8 38430893 38433067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01631 5 599 Carbohydrate Esterase AT3G05610 41.779 9.90e-171 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01631 K01051 - gmx:100820068 645.58