Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01630 ATGAAGAATATAGCTGTTATTTTTGTGTTTGGGGTGGCCATGGTGTCTGCCAATGCAGTTGCCTCCGCGGAGGAACATGGTGAGAAGAAACAGATTCTGTCCCCTCAAATGGGTGCGAAAATGCTCTGTAGTTCAGCCCAATACAAAGAAACCTGCAAACACAGCCTCTCAAAAGTATACAATCATACCACAGACAATAAAGAACTCGTGAAAACGGCCTTTGATGCGGCCGCGGAGGAGTTCAAGAAATTCATCGACAACTCCACCCTCTTCAAGGAGCTTGGCAAGGACAACATGACCAAACAGGCCATGGAAATCTGCCAAGAGGTGCTAGACTACGCCATTGACGACATTCAAAACTCAATCAATAGGGTGGACCAGTTCGACATAAGTAAGCTCGATGAATATGTCTATGATGTTAAGGTATGGCTCGGAGGCACTATCTCCCACCAACAAACTTGCTTGGACGGCTTTGAAAACACCACCACTCATGCGGCCGAGACCATGGCCAAGGTGTTGAACACGTCCCTCGAGCTTAGCGTGAACGCTTTGGACATTATTTCTGGCCTCTCCGACATCGCCGAAGCCTTCAAATTACCTGGATTTGCCAACATTCTGCAAACTTTTGGCAATGGCAACACCTCCGGTCAACTACAAGCTCGTGGCAATGACAATAGCTCCGATAAGGAAACTCATGCAAATGACAATAGCTTGCATCGGAAGCTTCTCGAGAGCTTGCCTTCGTGGGTAAGTGATAGACAACACCGTCACCTCCTGGCCACAGCCGCATCCGGAGCCGCCAATGTTAAACACGATGTTGTTGTGGCTCAAGATGGAACTGGACAGTTCACAACACTCACCGATGCTCTTAAAACTGTTCCAAAGAATAATACAAAACCCTATGTGATTTACGTGAAGGCCGGCATATATAATGAGATTGTGAATATCAGCAAGAAATCTAGTCACATCACTATCATCGGAGATGGCCCCACCCACACCAGATTCACCGGCAATCTTAGCTATGCCGATGACGTCCAAACTTACAACACTGCAACATTTGGTGTGAATGCTCCTTACTTCACAGCCATGCATGTAGGGATTGAGAACTCAGCCGGAGCAATTAAGCGCGAAGCTGTGGCGCTCCGAGTAACAGCAGATAAAGCTGTCTTCTACAATTGCCAAATTGACGGATACCAAGACACACTTTACGCGCAGTCCCACCGCCAGTTCTACCGGGACTGCGTTATCTCCGGCACTATCGACTTCATCTTCGGCGACGCGGCCATGGTCTTCCAGAATTGCACTTTGGTCGTCAGGCAGCCTTTAAGCAACCAGAACTCCATCGTCTCCGCCAGTGGCCGCAACGTGATCAACAGCCCTAGCGCCATGGTTTTCCAGAGCTGCCGCTTCACCGCGGATCCGCTCTACCTCTCCGACCCAGCGAAGAAACCGGCATACCTCGGACGGCCATGGAGGGCCTACGCCAAGGTGATTATATTGGATTCTCATATCGACGGCATCTTCGCTCCTGAAGGTTACACTTCTTGGATGGGTAGCAACTATCACACGTCCTGCATCTTCAACGAGTTCAACAACAAAGGTGCCGGCGCCGATACCTCTCACAGAGTGAAATGGACCGGCGTGAAGGTGATCACTGCTGCTAAAGCTGCAAATTTCTATCCTGGCAAGTTCTATGAATTCAGGAATGCAACTAACTCTGACGATGATTCATGGATCTCTGCCTCTGGGATTCCTTACTCCGCTGGCCCCGTGGCCGTACCAAATTGA 1788 0.4944 MKNIAVIFVFGVAMVSANAVASAEEHGEKKQILSPQMGAKMLCSSAQYKETCKHSLSKVYNHTTDNKELVKTAFDAAAEEFKKFIDNSTLFKELGKDNMTKQAMEICQEVLDYAIDDIQNSINRVDQFDISKLDEYVYDVKVWLGGTISHQQTCLDGFENTTTHAAETMAKVLNTSLELSVNALDIISGLSDIAEAFKLPGFANILQTFGNGNTSGQLQARGNDNSSDKETHANDNSLHRKLLESLPSWVSDRQHRHLLATAASGAANVKHDVVVAQDGTGQFTTLTDALKTVPKNNTKPYVIYVKAGIYNEIVNISKKSSHITIIGDGPTHTRFTGNLSYADDVQTYNTATFGVNAPYFTAMHVGIENSAGAIKREAVALRVTADKAVFYNCQIDGYQDTLYAQSHRQFYRDCVISGTIDFIFGDAAMVFQNCTLVVRQPLSNQNSIVSASGRNVINSPSAMVFQSCRFTADPLYLSDPAKKPAYLGRPWRAYAKVIILDSHIDGIFAPEGYTSWMGSNYHTSCIFNEFNNKGAGADTSHRVKWTGVKVITAAKAANFYPGKFYEFRNATNSDDDSWISASGIPYSAGPVAVPN 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01630 595 CDD PMEI-like_3 42 191 - -
Accr8g01630 595 PANTHER PECTINESTERASE 10 580 - -
Accr8g01630 595 ProSitePatterns Pectinesterase signature 1. 297 316 IPR018040 -
Accr8g01630 595 FunFam Pectinesterase 36 191 - -
Accr8g01630 595 SMART PMEI_2 34 186 IPR006501 GO:0004857
Accr8g01630 595 SUPERFAMILY Pectin lyase-like 269 588 IPR011050 -
Accr8g01630 595 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 191 IPR035513 -
Accr8g01630 595 FunFam Pectinesterase 4 269 590 - -
Accr8g01630 595 NCBIfam pectinesterase inhibitor domain 34 190 IPR006501 GO:0004857
Accr8g01630 595 Gene3D - 270 591 IPR012334 -
Accr8g01630 595 MobiDBLite consensus disorder prediction 216 235 - -
Accr8g01630 595 Pfam Plant invertase/pectin methylesterase inhibitor 42 186 IPR006501 GO:0004857
Accr8g01630 595 Pfam Pectinesterase 272 564 IPR000070 GO:0030599|GO:0042545
Accr8g01630 595 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 190 IPR035513 -
Accr8g01630 595 ProSitePatterns Pectinesterase signature 2. 416 425 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01630 Accr-Chr8 38425555 38427637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01630 4 592 Carbohydrate Esterase AT3G05610 39.731 9.54e-159 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01630 K01051 - gmx:100800194 614.379