Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01609 ATGGACGGCAATAAGGATGAAGCTTTGAAGTGTATTCGCATTGCTGAGGAGGCGATTGCAACAGGGAACAAAGAGCGTGCCCTTAAATTTATCAAAATTGCACAGCGGCTGAATAACAGTCTGTCTGTGGATGCGCTACTTACCATGTGTGAGAGGCTTGGTTCTCAATCATCTAGGCCTTCTGAGGATGAAAACGGTGTCCATCAGGCTAAGAGGGAGCGTGGTTCAAGACGAAGTGATGATGGATTGAATGGAGAGAGAAATTATACAGAAGAACATGTACAGTTGATTAGGGATACCAAGGGAAAGAACGATTATTATGCCATTCTTGGTGTTGAGAAGGCTTGTTCTGTTGAGGAGATTAGGAGGGCTTATAGGAAATTGTCGTTGAAGGTTCATCCTGACAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTTAAGTGTTTGAGTGATGATGGTTCAAGGAGGCAGTATGATCAGACAGGGCTGGTGGAGGATTTTGAATACAACCAGCAGCACAATTTTAGGCGCAGGAGAGGAAGGACAACCACACATGACTTCTTTAACGATGACATTGATCCTGATGAGATATTCAGGGCATTCTTTGGTGACGCCGATGTATTTGGGAGAGCTCAAGTTTATCGGACAAGGGGAATGGGTGTTCACCAGCGGCAAGAATTTCAAGGCGGAGGACTCAATATTATGCTCCTTATGCAAATTGTACCGTTCTTGATAATATTTCTGCTTGCATACTTGCCGTTTTCTGAACCAGACTATTCATTGCATAAGAATTACTCATATCAGATTCCCAAGACAACAGTGAAGCATGAGATTGAGTTTTTTGTGAAATCTGAATCATTTGAAGCTAAATATCCACATGGAAGTCCTGCCCGTGCAAACATTGAAAGCAGTGTAATACATGATCACAAAAACTTGCTTCGTCGCTACTGTCAAATAGAACTCCAGAGGCGTAGTTGGAATAGGAATCTACCAACTCCTTACTGTGAAAAGCTTCATAAGCTTGGCGTAGCTTGA 1056 0.429 MDGNKDEALKCIRIAEEAIATGNKERALKFIKIAQRLNNSLSVDALLTMCERLGSQSSRPSEDENGVHQAKRERGSRRSDDGLNGERNYTEEHVQLIRDTKGKNDYYAILGVEKACSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEDFEYNQQHNFRRRRGRTTTHDFFNDDIDPDEIFRAFFGDADVFGRAQVYRTRGMGVHQRQEFQGGGLNIMLLMQIVPFLIIFLLAYLPFSEPDYSLHKNYSYQIPKTTVKHEIEFFVKSESFEAKYPHGSPARANIESSVIHDHKNLLRRYCQIELQRRSWNRNLPTPYCEKLHKLGVA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01609 351 SMART dnaj_3 104 161 IPR001623 -
Accr8g01609 351 SUPERFAMILY Chaperone J-domain 102 216 IPR036869 -
Accr8g01609 351 CDD DnaJ 105 158 IPR001623 -
Accr8g01609 351 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Accr8g01609 351 Pfam DnaJ domain 105 166 IPR001623 -
Accr8g01609 351 Pfam Domain of unknown function (DUF1977) 262 332 IPR015399 -
Accr8g01609 351 MobiDBLite consensus disorder prediction 64 90 - -
Accr8g01609 351 PANTHER AT29763P-RELATED 1 347 - -
Accr8g01609 351 MobiDBLite consensus disorder prediction 54 90 - -
Accr8g01609 351 Gene3D DnaJ domain 101 220 IPR036869 -
Accr8g01609 351 PRINTS DnaJ domain signature 141 161 IPR001623 -
Accr8g01609 351 PRINTS DnaJ domain signature 107 125 IPR001623 -
Accr8g01609 351 PRINTS DnaJ domain signature 125 140 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01609 Accr-Chr8 38212853 38213908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01609 106 166 C2H2 Transcription Factor Family AT1G74250 43.284 2.15e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01609 K09518 - qsa:O6P43_003572 538.88