Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01592 ATGGCTAGTACTGAAGGAGAACTCAAAATAAGTTTTGGCTATCAATGCAATAGTAATAGAGTTTCCTCTTCTAAGTTAATTGATCATTATAAAATCCTACCTTCACTGCGTAAAACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCCACATTAGCCAACACTAACATCTGCGATGGTCTTATAGGAGAAGAAATTCTTCCAAACTGGGACTCCCCTACTATGTTTCGTAAGGTTCCCTCTTCCTCTAGCCTTTCAAGGTTGGATATGCTGTCATCTTCTTTCCAAAGCACTTTGTCAAATTTAAGTTGCAGTCCTTCCCCCTCGAGTAATATGCTTGAACACGACTCTTCCACAATGGCTCCTTCAAGAAGTGAAGGTTTTCTTAACGCCATGGAAGTACAGGTAGCAGGAGGAGCTGCTGGTGAAGATCGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTTTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCTGCTGACTTTCTGGCCGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATCCTGAATTGGAGACAGATTCTGTCAGTACTTCAGGCTTGGATCGATCTGTCCAACATAAGTTGGATGATAGCCTTCATAATTGTGACAAGCAATCATTTTCGGATGGGATACTTGATTGCCTGCAGCGTGCTCTTAGTCAGGTTGAGAATGATTTCTTACATATGGTTGAGCAAGAAAAAGAGGATCGCCCGGACCTGGTTTCAATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTATATACACTTAATCTTGGTGACAGCAGAGCAGTACTGGCAACGAGCATTTGTGAATCAAATGGGGCTGGAAAACTCAAAGCTATCCAGCTCACAGATAGTCACACTGTTGCAAATGAAGCTGAAAGAGCTCAGCTTCTGGCAGATCATCCTGATGATCCTATGATCATCACATCAGGAAGAGTAAAAGGAAAATTGAAGGTTACTCGCGCAGTTGGAGTTGGCTATTTGAAAAAGAAAAATTTGAATGATGCACTGATGGGGATCCTTCGGGTTCGTGATCTTGTAAGCCCTCCATATATTTCCGCGGAACCCTCATTAGGTGTCCATAAGATCTCAAGTTCTGATCGTTTCGTCATAGTGGGGAGTGATGGTTTATTTGATTTCTTCAACAATGACGAGGCAGTGGAGCTTGTAGAGTCTTATATCCAGAGCAATCCTTCTGGTGATCCTGCAAAGTTTCTCGTCGAGCAGCTTGTCTCAAGAGCAGCTGATTGTGCAGGTTTCAGCATGGAAGAGTTAATGAATATTCCAGCAGGAAGGAGGAGGAAGTACCATGACGATGTAACTGTAATAGTGATCATCCTTGGCACTAATCAGCGGACTTTAAAGGCATCAACTTGTATATGA 1458 0.4204 MASTEGELKISFGYQCNSNRVSSSKLIDHYKILPSLRKTSSFSCLSGAALSANATLANTNICDGLIGEEILPNWDSPTMFRKVPSSSSLSRLDMLSSSFQSTLSNLSCSPSPSSNMLEHDSSTMAPSRSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYPELETDSVSTSGLDRSVQHKLDDSLHNCDKQSFSDGILDCLQRALSQVENDFLHMVEQEKEDRPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATSICESNGAGKLKAIQLTDSHTVANEAERAQLLADHPDDPMIITSGRVKGKLKVTRAVGVGYLKKKNLNDALMGILRVRDLVSPPYISAEPSLGVHKISSSDRFVIVGSDGLFDFFNNDEAVELVESYIQSNPSGDPAKFLVEQLVSRAADCAGFSMEELMNIPAGRRRKYHDDVTVIVIILGTNQRTLKASTCI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01592 485 ProSiteProfiles PPM-type phosphatase domain profile. 132 472 IPR001932 -
Accr8g01592 485 CDD PP2Cc 145 472 IPR001932 -
Accr8g01592 485 SUPERFAMILY PP2C-like 145 473 IPR036457 -
Accr8g01592 485 SMART PP2C_4 126 470 IPR001932 -
Accr8g01592 485 Gene3D - 103 480 IPR036457 -
Accr8g01592 485 Pfam Protein phosphatase 2C 210 426 IPR001932 -
Accr8g01592 485 PANTHER PROTEIN PHOSPHATASE 2C 107 470 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01592 Accr-Chr8 38058331 38060275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01592 6 485 PP2C-type Phosphatase Gene Family AT3G16560 62.677 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01592 - - vra:106768999 682.559