Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01580 ATGTTTAATTCCCAGTGCCTCAAGGCCCTTCTTATAAGAACATCACCAACCTTACGATGCTTTCGTCTATTGCAACAACACTACCCTTCACCCACATCCTCTCTCAAATACAGCACAAGTGCTTCTCCAGGTGATCACTCGTTTACTGTATCATACCTCATCAACAGTTTAGGGTTTTCCCTAGAAGCTGCTTTAAATGCTTCCAAGAAAGTTCGATTTGACACCTCACAAAAGCCAGATTCAGTTGTGAGCTTATTCGAAAGCCACGGTTTCTCTAAGTCTATCATAAAAGATGTCATCAGAAAGGATCCATGGCTTCTTTTGTGCGATCCCCAACATAATATTTTGCCCAAGTTTGAATTTTTGCTCTCAAAAGGTGCAACTACCTCCGACCTTAACTTCATGGTGCGAAGGACCCCTAGATTCCTGATGAGAAGCTTAGAGAATCACATAATCCCATCGTATGAATTGCTAAAAGGGTTTCTTCAGAATGATAAAACCACCATTTCAAGTATAAAAGGCTATCCAGATATGCTTTATGACTCTCGAGCAATACAAAGTATTAACTTGTTGCTAGAGAATGGAGTGTCAAGGACAAACGTTGCTCTCTTACTCGGAAGGAGGCCTCGTGTACTGCACTTCCCTAATCTCCTTACGAAGGCGGTAGAGGAAGTCAAGTGTTTGGGATTTAATTCTTTCAGTGCAACATTTGGTGTTGCATTGATAGCTAAAACGCTTTTGAGTAAGTCCCTCTGGGACGCTAAAGTTGATCTCTACAAGAGATGGGGATGGTCAGAAGAAACATTGTTAGAAGCATTTAGGAAGCAACCACACTGTATGTTAGCATCAAGGGATAAGATTAATGCGGTGATGAGTTTTTGGGTTAACCAGTTGGGTTGGAATTCTTTGCTCCTTGTCAAGGGACCGAATATGTTTCTATACAGCTTAGAGAGAAGGATTATCCCAAGGGCTTCAGTTTTACATTACCTTCAGTCAAAAGGGTTGATAAAAAAGAATGCTAGCTTAGTTGTGCCATTTGCTTTGACTGAAAGGCAGTTCCTGGAAAGATTTGTGGAATGTTATGAGGGGCATAATCATCGTTTATTGAAGCTATATGAAGAGAAATTGAAGAATGCTGGAATGTCATGTGCTTGA 1155 0.4078 MFNSQCLKALLIRTSPTLRCFRLLQQHYPSPTSSLKYSTSASPGDHSFTVSYLINSLGFSLEAALNASKKVRFDTSQKPDSVVSLFESHGFSKSIIKDVIRKDPWLLLCDPQHNILPKFEFLLSKGATTSDLNFMVRRTPRFLMRSLENHIIPSYELLKGFLQNDKTTISSIKGYPDMLYDSRAIQSINLLLENGVSRTNVALLLGRRPRVLHFPNLLTKAVEEVKCLGFNSFSATFGVALIAKTLLSKSLWDAKVDLYKRWGWSEETLLEAFRKQPHCMLASRDKINAVMSFWVNQLGWNSLLLVKGPNMFLYSLERRIIPRASVLHYLQSKGLIKKNASLVVPFALTERQFLERFVECYEGHNHRLLKLYEEKLKNAGMSCA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01580 384 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 SMART mt_12 202 231 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 Pfam mTERF 84 287 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 Pfam mTERF 185 353 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 Gene3D Transcription termination factor 3, mitochondrial 175 370 IPR038538 -
Accr8g01580 384 PANTHER CGI-12 PROTEIN-RELATED 46 361 IPR003690 GO:0003690|GO:0006355
Accr8g01580 384 FunFam Mitochondrial transcription termination factor-like 147 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01580 Accr-Chr8 37934360 37935514 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr8g01580 mTERF 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01580 K15031 - gmx:102667698 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g01580 8 37934360 37935514 Accr8g01580 8 37934360 37935514 ECH