Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01579 ATGTTTAGTTCCCAGTGCCTCAAGGCCCTTGTTATAAGAACATCACCAACCTTACGATGCTTTCATCTATTGCAACAACACTACCCTTCACCCACATTCTCTCTCAAATACAGCACAAGTGCTTCTCCAGGTGATCACTCGTTTACTGTATCATACCTCACTAACAGTTTAGGGTTTTCCCTAGAAGCTGCTTTAAATGCTTCCAAGAAAGTTCGATTTGACACCTCACAAAAGCCAGATTCAGTTGTTAGCTTCTTCGAAAGCCACGGTTTCTCTAAGTCTATCATAAAAGATGTCATCAGAAAGGATCCATGGCTTCTTTTGTGCGATCCCCAACATATTATTTTGCCCAAGTTTGAATTTTTGCTCTCAAAAGGTGCAACTACCTCCGACCTTAACTTCATGGTGCGAAGGACCCCTAGATTCCTGCTGAGAAGCTTAGAGAATCACATAATCCCATCTTATGAAACGCTAAACGGGTTTCTTCAGAATGATAAAATCACCATTTCAAGTATAAAAGGCTATCCAGATATGCTTTATGACTCTCGAGCAATACAAAGTCTTAACTTGTTGCTAGGGAATGGAATGTCAAGGACAAGCATTGCTCTTATACTCAGAAGGAGGCCTCGTGCATTGCACTCTCCTAATGTCCTTACAAAGGCGGTAGAGGAAGTTAAGTGTTTGGGATTTAATCCTTTGTGTACAACGTTTGGTATTGCATTGATAGCTAAAACGCTTTTGAGTAAGTCCCTCTGGGACGCTAAAGTTGATCTCTACAAGAGATGGGGATGGTCAGAAGAAACATTGTTAGAAGCATTTAGGAAGAACCCACACTGTATGTTAGCATCAAGGGATAAGATTAATGCGTTGATGAGTTTTTGGGTTAACCAGTTGGGTTGGAATTCTTTGCTCCTTGCCAAGGGTCCGAATATGTTTCTATACAGCTTTGAGAGGAGGATTATCCCGAGGGCTTCAGTTTTACGTTATCTTCAGTCAAAAGGTTTGATAAAAAAGAATGCTAGCTTAGTTGTGCCATTTGCTTTGACTGAAAGGCAGTTCCTGAAAAGATTTGTGGAATGTTTTGAGGAGCATAATCATCGTCTATTGAAGCTATACGAAGAGAAATTGAAAAATGATGGAATGCCAAGTGCTTGA 1155 0.4052 MFSSQCLKALVIRTSPTLRCFHLLQQHYPSPTFSLKYSTSASPGDHSFTVSYLTNSLGFSLEAALNASKKVRFDTSQKPDSVVSFFESHGFSKSIIKDVIRKDPWLLLCDPQHIILPKFEFLLSKGATTSDLNFMVRRTPRFLLRSLENHIIPSYETLNGFLQNDKITISSIKGYPDMLYDSRAIQSLNLLLGNGMSRTSIALILRRRPRALHSPNVLTKAVEEVKCLGFNPLCTTFGIALIAKTLLSKSLWDAKVDLYKRWGWSEETLLEAFRKNPHCMLASRDKINALMSFWVNQLGWNSLLLAKGPNMFLYSFERRIIPRASVLRYLQSKGLIKKNASLVVPFALTERQFLKRFVECFEEHNHRLLKLYEEKLKNDGMPSA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01579 384 PANTHER CGI-12 PROTEIN-RELATED 46 360 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 SMART mt_12 202 231 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 Gene3D Transcription termination factor 3, mitochondrial 169 371 IPR038538 -
Accr8g01579 384 Pfam mTERF 83 288 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 Pfam mTERF 186 353 IPR003690 GO:0003690|GO:0006355
Accr8g01579 384 FunFam Mitochondrial transcription termination factor-like 147 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01579 Accr-Chr8 37922898 37924052 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr8g01579 mTERF 5.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01579 K15031 - gmx:102667698 340.502