Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01572 ATGTGGCTCCGTAATTTTTCTATATCAAACACAAAGAACAAATTCACTGTGGTGGGGTGTGACTCCTACGGTCACATCAAGGACCTGAACAGCACGTTTACAACTGGCTGCTCGTTGAGTTGCAGTAGCGAGACGAGGTTTGAGGAAGCAGGGTCATGCTCTGGTGTGGGATGTTGCCAAACCAGTTTACCTCAAGGCATGAGGAACTATAAGATCACCTTACGGAGCTTTGACAATTACTCGGACGTGCGTGACTTCAACCCTTGCGGCTATGCGTTTATTGCCAAGGAAAAATCCTTTTTGTTCTCAAAACAAGAGCTGCTTGATCTCAGCAACAGAACACAATTTCCCGTGGTTGTGGACTGGGCTGTTTCCAATCAGAAATGCCGTGAAGCCCAAAAAGACGCAAGGAGCTATGCCTGCAAGCAAAACAGTAGATGTAAAGAATCACTAAGTGGTATTGGGTACTACTGCGTATGTGAAGATGGGTTCAGAGGCAATCCCTATCACTCTAACCTCGATGCCGGCTGCAAAGATATTAATGAGTGTGAAGGGGACAATCGTTGCAGTAGGAGATGCCACAACGTCGATGGAAATTATAAGTGTTCTTGTCCGCGGGGTTATAGAGGCGATGGCTATAAAGACGGATCAGGCTGCAAGTTCCCCATCGTAGAAATTTCACTAGGCATTTCTGTAGGCTTGCCTGTTATCTTTACAGTGGTCTCCATATTATACTGGGGAAACAAGCAAAGAGCACTAACACAACTTAGAAGACAATATTTTGAGCAAAATGGAGGAAATTATATGCTGCAACAACATCAACAACAACATAGAGACACTGAACGAACCAGAATTTTTGCCGAACACGAGCTCAAAACTGCCACAAACAACTTTGATGAGAGCAGAATTCTTGGTTGTGGAGGACAAGCCACGGTTTATAAGGGCATATTACCAGGTGACTTACTTGTTGCCATTAAAAAGTCCAAAATAGGAGGTGACTCAAGACAAGTTCGGGATTTTATCAATGAAGTGATTGTACTTTCCCAAATCAACCATAATAATGTGGTTAAACTTTTGGGGTGTTGTCTTGAAACTAAAGTTTCCTTGCTGGTTTATGAGTTTGTGGAAAATGGTACCCTTCTTGACTATATAGACCCACTAAAGAATGAGGACTCTTTTTCGTGGGAGACTCGATTAAGGATAGCTGCAGATACAGCTGAGGCCATTTCACATTTACATTCTCACACTTCCGTGCCAATTGTTCACCGTGATATTAAATCTGCCAACATACTATTAGATCACAATCATATGGCAAAAGTTTCTGACTTTGGATCTTCAAGACTTGTTCCTGCCGATGAAAATCAAGTTTATACTGCGATTCAAGGGACATTAGGATATTTGGATCCAGAGTACCTTCATATAGGTCGATTGAATGAGAAAAGTGACGTATATAGCTTTGGGGTTGTGCTTCTAGAGCTAATAACTGGGAAGAAACCAGTTGAATTCGATGGGCTAGGACCGAAACATTTGACAACATACTTTGCATCACCAATGGAAGAAGGTAGCTTGTTGGAGGTTCTTGACAAGCGAGTGTTGAATCAAAAGAATGTAGAGCAGCTAAAGGAGGTTTCTTTGCTAGCAAGAAGGTGCGTCAGAGTTAATGGAGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAAAGGGTCTAATTGCTGTGAAAAAGCATCCTTGGGTAAAAGGAGGCGATATGATGTCTGAAGAATGTGAAAGCTTGCTTGGTCATGCTGTTGCTAGCACTTCAGCTGGTACTTCAACTGGTTATGTTAGAGCTAGGACTTTTGCTGCTCATGATAGCACACAGAAGCAAGTGGCATTTGAGATTGCAGATGGGCGACGATCATTTTAG 1911 0.4254 MWLRNFSISNTKNKFTVVGCDSYGHIKDLNSTFTTGCSLSCSSETRFEEAGSCSGVGCCQTSLPQGMRNYKITLRSFDNYSDVRDFNPCGYAFIAKEKSFLFSKQELLDLSNRTQFPVVVDWAVSNQKCREAQKDARSYACKQNSRCKESLSGIGYYCVCEDGFRGNPYHSNLDAGCKDINECEGDNRCSRRCHNVDGNYKCSCPRGYRGDGYKDGSGCKFPIVEISLGISVGLPVIFTVVSILYWGNKQRALTQLRRQYFEQNGGNYMLQQHQQQHRDTERTRIFAEHELKTATNNFDESRILGCGGQATVYKGILPGDLLVAIKKSKIGGDSRQVRDFINEVIVLSQINHNNVVKLLGCCLETKVSLLVYEFVENGTLLDYIDPLKNEDSFSWETRLRIAADTAEAISHLHSHTSVPIVHRDIKSANILLDHNHMAKVSDFGSSRLVPADENQVYTAIQGTLGYLDPEYLHIGRLNEKSDVYSFGVVLLELITGKKPVEFDGLGPKHLTTYFASPMEEGSLLEVLDKRVLNQKNVEQLKEVSLLARRCVRVNGEERPTMKEVATELKGLIAVKKHPWVKGGDMMSEECESLLGHAVASTSAGTSTGYVRARTFAAHDSTQKQVAFEIADGRRSF 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01572 636 Gene3D Phosphorylase Kinase; domain 1 268 374 - -
Accr8g01572 636 SMART egfca_6 179 220 IPR001881 GO:0005509
Accr8g01572 636 FunFam Wall-associated receptor kinase 2 268 374 - -
Accr8g01572 636 ProSiteProfiles EGF-like domain profile. 179 211 IPR000742 -
Accr8g01572 636 ProSitePatterns Calcium-binding EGF-like domain signature. 179 202 IPR018097 GO:0005509
Accr8g01572 636 FunFam Fibrillin 2 174 215 - -
Accr8g01572 636 Gene3D Transferase(Phosphotransferase) domain 1 375 582 - -
Accr8g01572 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Accr8g01572 636 SUPERFAMILY EGF/Laminin 179 212 - -
Accr8g01572 636 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 193 204 IPR000152 -
Accr8g01572 636 Gene3D Laminin 136 181 - -
Accr8g01572 636 CDD STKc_IRAK 304 571 - -
Accr8g01572 636 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 5 571 IPR045274 GO:0007166
Accr8g01572 636 Gene3D Laminin 182 221 - -
Accr8g01572 636 SMART serkin_6 298 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01572 636 ProSiteProfiles Protein kinase domain profile. 298 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01572 636 FunFam Wall-associated receptor kinase 2 375 591 - -
Accr8g01572 636 CDD EGF_CA 179 211 - -
Accr8g01572 636 Coils Coil 270 290 - -
Accr8g01572 636 SUPERFAMILY Protein kinase-like (PK-like) 280 568 IPR011009 -
Accr8g01572 636 SMART egf_5 128 178 IPR000742 -
Accr8g01572 636 SMART egf_5 182 220 IPR000742 -
Accr8g01572 636 Pfam Protein tyrosine and serine/threonine kinase 301 568 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01572 Accr-Chr8 37744699 37747317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01572 1 633 Receptor kinase-like Gene Family AT1G21230 44.564 9.39e-178 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01572 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01572 - - pcin:129293718 670.618