Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01565 ATGGGTTTGGATGCACTGCATTTGAAACTGCTATTGCTGCTCTGCACGGCGACGGCGGCGGCGGCGGCCACGGCCCAAACGAAACCAGGTTGCAACGACAGGTGTGGGAACGTGAGCATCCCCTATCCCTTTGGCACTAGCAAGAATTGCTACATCGATGAATTATTTTCCGTCAATTGCACAACGACCATGTCACCATCTGGAGAAGCCACAACACAATTGATTTACGGCTCTAATATACCAGTCCTCAACATCTCCCTGGATCCTCCTGAATTAACTGTCTCCGCAAACGTTTCCTACCATTGCTATGATTCAAGCTATGCGTATAATTGGATACGGTTCGGTAAGTTTTCTATATCAAACTCGAAGAACAGATTCACTGTGGTGGGCTGTGACACCAACGCTTCCATCAAAGACTTGAGGGGAAACAGATTTCAAACTGGCTGCACCTTGAAATGCAGTAACAAGCTGAGGTTTGAGAACGGTGCATGCTCTGGTGTGGGATGTTGCCAGACCAGTTTCCCCAAAGCCATTAGAAACTATAGTATCAGCTTATCCAGTGATAACAATTACACGGACGTGCGTGATTTCAACCCTTGTGGCTATGCATTTATTGCCAAGGTCGGATCCTTCGAGTTTTCATATCAAGACCTGTTTGATCTCAGCAACAGAACAGAATTTCCCGTCGTTATGGATTGGGCTGTTGGCAATCAGACATGCCTTGATGCCCAGAGAGATCCAAGCAGCTATGCCTGCAAGCAAAACAGTAGATGCCAAGACTCAAATGGTACTACTGGGTACTACTGCGTATGTGAACAAGGGTTCAGTGGCAACCCCTACCTCGATTCAGGCTGCAAAGATATTAATGAGTGCCTTGGAGAGAATCGCTGCAGTAGGAAATGCCACAACATTGATGGAAATTATACGTGTTCTTGTCCCCGGGGATATAAAGGCGACGGCTATAAAGATGGATCTGGCTGCAAATTCCCTATCATGGAAATTTCATTAGGCATTTCTATAGGCTTGCTTGTTGTCTTCACATTAGTCTCCACCTTATGTTGGGGACGCAAGCAAAGAGCACTAAAACAACTTAGAAGACAGTACTTTAATCAAAATGGAGGAAATTATATGCTACAACAACTTTATCAACAACAAGGACACACTAATAGAACCAAGGTTTTTACTGAAGATGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGCAGAATTCTTGGTCATGGTGGACAAGGCACAGTTTACAAAGGGATATTACCTGATAACATGCATGTTGCCATTAAAAAGTCCAGAGTAGGAGGTGACCCTAGACAAGTTAAAGATTTTGTCAATGAAGTGGTTGTCCTTTCCCAAATTAACCATAGAAATGTGGTTAAGCTTTTTGGTTGCTGTCTTGAAACTGAAGTCCCTTTGTTGGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGATCATATGGAACCATTAAAGAATGAGCACTCTCTCTCATGGAAGACCCGATTACAAGTAGCTGCAGAAACAGCTGCAGCCATCTCATATTTACACTATGCTGCTTCTATTCCTATTATTCATCGCGATATTAAATCTGCCAACATACTATTAGATCACAGTCATAGAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCGATGAAACTCAAGTTACCACTGTGGTTCAAGGGACATGGGGATATTTGGATCCAGAGTACATCCTTACAGGTCAATTGGATGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTGCTTGTGGAGCTAATCACGGGGAATAAAGCAGTTGAATTCAATAGGCCAGAAGAACAAAGAAATTTGGCTATGTACTTCGCATCTTCAATGAAAGAAGACAACTTGTTGGAGATTCTTGACAAGCGAGTATTGGATCAGAAGAATGCAGAGCAGATAACAGAAGTTGCTTTCTTAGCAAGGAGGTGCATTAGAGTTAATGGGGAGGAAAGGCCGACTATGAAAGAAGTAGCAATGGAATTAGAGGGATTGATGGCTCAAGGAAAACATCCTTGGGTAAAGGGAGAGGATATGATGTTTGAAGAATGTGAGCCTTTGGTTGGTCATTTAGCTGGTGGATACGGGAATGCTAGTGCAAGCAATTCAGCTGCCTATGATAGCATACAGAAACAAATAGCATTTGAGATTGAAGATGGGCGATGA 2211 0.4306 MGLDALHLKLLLLLCTATAAAAATAQTKPGCNDRCGNVSIPYPFGTSKNCYIDELFSVNCTTTMSPSGEATTQLIYGSNIPVLNISLDPPELTVSANVSYHCYDSSYAYNWIRFGKFSISNSKNRFTVVGCDTNASIKDLRGNRFQTGCTLKCSNKLRFENGACSGVGCCQTSFPKAIRNYSISLSSDNNYTDVRDFNPCGYAFIAKVGSFEFSYQDLFDLSNRTEFPVVMDWAVGNQTCLDAQRDPSSYACKQNSRCQDSNGTTGYYCVCEQGFSGNPYLDSGCKDINECLGENRCSRKCHNIDGNYTCSCPRGYKGDGYKDGSGCKFPIMEISLGISIGLLVVFTLVSTLCWGRKQRALKQLRRQYFNQNGGNYMLQQLYQQQGHTNRTKVFTEDELKIATNNFDESRILGHGGQGTVYKGILPDNMHVAIKKSRVGGDPRQVKDFVNEVVVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHMEPLKNEHSLSWKTRLQVAAETAAAISYLHYAASIPIIHRDIKSANILLDHSHRAKVSDFGASRLVPLDETQVTTVVQGTWGYLDPEYILTGQLDEKSDVYSFGVVLVELITGNKAVEFNRPEEQRNLAMYFASSMKEDNLLEILDKRVLDQKNAEQITEVAFLARRCIRVNGEERPTMKEVAMELEGLMAQGKHPWVKGEDMMFEECEPLVGHLAGGYGNASASNSAAYDSIQKQIAFEIEDGR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01565 736 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 682 IPR045274 GO:0007166
Accr8g01565 736 ProSitePatterns Calcium-binding EGF-like domain signature. 287 310 IPR018097 GO:0005509
Accr8g01565 736 ProSiteProfiles EGF-like domain profile. 287 319 IPR000742 -
Accr8g01565 736 CDD STKc_IRAK 412 680 - -
Accr8g01565 736 SMART egfca_6 244 286 IPR001881 GO:0005509
Accr8g01565 736 SMART egfca_6 287 328 IPR001881 GO:0005509
Accr8g01565 736 Pfam Calcium-binding EGF domain 287 320 IPR001881 GO:0005509
Accr8g01565 736 SUPERFAMILY Protein kinase-like (PK-like) 387 677 IPR011009 -
Accr8g01565 736 FunFam Fibrillin 2 282 323 - -
Accr8g01565 736 CDD EGF_CA 287 319 - -
Accr8g01565 736 Gene3D Transferase(Phosphotransferase) domain 1 483 694 - -
Accr8g01565 736 SMART egf_5 239 286 IPR000742 -
Accr8g01565 736 SMART egf_5 290 328 IPR000742 -
Accr8g01565 736 Gene3D Laminin 290 329 - -
Accr8g01565 736 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
Accr8g01565 736 FunFam Wall-associated receptor kinase 2 376 482 - -
Accr8g01565 736 Gene3D Phosphorylase Kinase; domain 1 377 482 - -
Accr8g01565 736 SMART serkin_6 406 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01565 736 Pfam Protein tyrosine and serine/threonine kinase 409 677 IPR001245 GO:0004672|GO:0006468
Accr8g01565 736 ProSiteProfiles Protein kinase domain profile. 406 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01565 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Accr8g01565 736 Gene3D Laminin 238 289 - -
Accr8g01565 736 SUPERFAMILY EGF/Laminin 287 320 - -
Accr8g01565 736 FunFam Wall-associated receptor kinase 2 483 699 - -
Accr8g01565 736 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01565 Accr-Chr8 37660831 37665647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01565 8 736 Receptor kinase-like Gene Family AT1G21230 45.745 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01565 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01565 - - csin:114299404 773.467