Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01564 ATGAAGCTTGTTGATCTGAAAAATGCTTTTCATTTGAAACTGGTATTGCTTCTCTGCACGTTGGCCCAAACCAAAGCTGCAGATTGCAACAGCTCATGTGGGAACTTGGACATCCCATATCCCTTTGGCACTTCCAATGACTGCTATATCGATGAAAGGTTCTTCATCAACTGCACAACAACCACCAACAAGTCTTCATCATCTTCATCTGCACAACCAATAGCTTATCTGAGAGGTGGTGGTATACCAGTTCTCAACATATCCTTGGATCCTCCTGAATTGACCATCTTGGCAGAGGTTTCCAAGCAGTGCTACAATTCTGGTTTTACTGCCTCGTGGAATGAAATTTGGTTTGAGAAGTTCTCTATATCAAACACGAAGAACAGATTCACTGTGGTGGGCTGTGACACCTCTGCTTATATCAGAGACTTGACTGGAAAGAGGTTTCAAACTGGGTGTACTTTGAATTGCAATAACAATAGCTTTGAGGATTGGTCATGTTCTGGTGTGGGATGTTGCCAGACAAGTTTCCCTAGAGCCATAAGGAATTATACTATCAACATAACTACTTTTGACAACTATAGGGATGTCAGAGAGTTCAACCCTTGTGGCTATGCTTTTATTGCTCAGGATGGATCCTTCAATTTCTCAGCTCGAGAGCTACTTGATCTCGGCAACAGAACGCAATTTCCCGTGGTTCTGGACTGGGCTGTTGGCGATCAGACATGTGTTGAAACACAGAGAAATGGAAGCAGCTATGCCTGCAAGCACAACACCAGATGCCTACAGTCAGTAACTGGGATTGGCTACCAGTGCCTTTGTGAAGATGGCTTCAAAGGCAACCCCTACCTCTCTCACCCTCTTTATGGCTGCAAAGATATTAATGAGTGCGAGGGAGAGAATCGATGTAGTATGAGATGTCACAATGTGGAAGGAAATTATACATGTTCTTGTCCCCGGGGATATAAAGGCAATGGCTATAAAGATGGATCAGGCTGCAAATTGCCTGTCATGGAAATTTCATTAGGCATTTCTGTAGGCTTGCTTGTTGTCTTCACATTGGTCTCCACATTATGTTGGGGACACAAACAAAGAGCACTAAAACAACTTAAAAGACAGTACTTTGAGCAAAATGGAGGTAATTATATGCTACAACAACTTTATCAACAACAAGGACACACTAATAGAACCAAGATTTTTACTGAAGATGAGCTCAAAATTGCTACAAACAACTTTGATGAGAGTAGAATCCTTGGTCGTGGGGGACAAGGCACAGTTTACAAGGGTCTATTACCAGATAAGATGCAAGTTGCCATAAAAAAGTCTAGAGTAGGTGGAGACCCGAGACAAATTAAGGATTTTATCAGTGAAGTGGTTGTACTTTCCCAAATCAATCATAGAAATGTGGTAAAACTTTTTGGGTGTTGTCTTGAAACTGAAGTTCCTTTGTTAGTTTATGAGTTTGTAGACAACGGCACCCTTCTTGATCATATAGATCCACTAAAAAATGAGCACTTTCTTTCATGGGAGACTCGATTAAGGATAGCCGCAGAAACAGCTGGGGCCATTTCATATTTACATTCTTCTGCTTCCATCCCAATTATTCATCGTGATATAAAATCTACCAACATATTATTAGATTACACTCATAGAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCAATGAAACTCAAGTTACCACAATGGTTCAAGGGACATGGGGATATTTGGACCCAGAGTACCTCCTTACAGGTCAATTGGATGAGAAGAGTGATGTTTATAGCTTTGGAGTTGTGCTTGTGGAGCTACTCACTGGGAATAAAGCAGTTGAATTCAATAGGCCAGAAGAACAAAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTGTGGGAGATTCTTGACAAGCGAGTGTTGGATCAAAAGAATGCAGAGCAAGTAAAGGAAGTTGCCTTCTTAGCGAAAAAGTGCATTAGAGTTAACAGAGAGGAAAGGCCAACTATGAGAGAGGTAGCAATGGAATTAGAGGGTCTAATTGCTATGAAAAAGCATCCTTGGGGAAAGGGAGAGAAGATGATGTCTGAAGAATGTGAATATTTGCTAGATCAAGTAGCTAATGGATATGGGAATGCCAGTGCTAGCAGTTCAGCTGCCTATGATAGCATACGTAAACAAATAGCATTTGAGATTGAAGATGGGCGATGA 2229 0.4114 MKLVDLKNAFHLKLVLLLCTLAQTKAADCNSSCGNLDIPYPFGTSNDCYIDERFFINCTTTTNKSSSSSSAQPIAYLRGGGIPVLNISLDPPELTILAEVSKQCYNSGFTASWNEIWFEKFSISNTKNRFTVVGCDTSAYIRDLTGKRFQTGCTLNCNNNSFEDWSCSGVGCCQTSFPRAIRNYTINITTFDNYRDVREFNPCGYAFIAQDGSFNFSARELLDLGNRTQFPVVLDWAVGDQTCVETQRNGSSYACKHNTRCLQSVTGIGYQCLCEDGFKGNPYLSHPLYGCKDINECEGENRCSMRCHNVEGNYTCSCPRGYKGNGYKDGSGCKLPVMEISLGISVGLLVVFTLVSTLCWGHKQRALKQLKRQYFEQNGGNYMLQQLYQQQGHTNRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGLLPDKMQVAIKKSRVGGDPRQIKDFISEVVVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEHFLSWETRLRIAAETAGAISYLHSSASIPIIHRDIKSTNILLDYTHRAKVSDFGASRLVPLNETQVTTMVQGTWGYLDPEYLLTGQLDEKSDVYSFGVVLVELLTGNKAVEFNRPEEQRNLAMYFASSMKEDNLWEILDKRVLDQKNAEQVKEVAFLAKKCIRVNREERPTMREVAMELEGLIAMKKHPWGKGEKMMSEECEYLLDQVANGYGNASASSSAAYDSIRKQIAFEIEDGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01564 742 Gene3D Laminin 240 327 - -
Accr8g01564 742 Gene3D Phosphorylase Kinase; domain 1 383 488 - -
Accr8g01564 742 ProSitePatterns Calcium-binding EGF-like domain signature. 293 316 IPR018097 GO:0005509
Accr8g01564 742 FunFam Fibrillin 2 288 329 - -
Accr8g01564 742 CDD STKc_IRAK 418 686 - -
Accr8g01564 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 686 IPR045274 GO:0007166
Accr8g01564 742 SMART egf_5 296 334 IPR000742 -
Accr8g01564 742 SMART egf_5 242 292 IPR000742 -
Accr8g01564 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Accr8g01564 742 FunFam Wall-associated receptor kinase 2 382 488 - -
Accr8g01564 742 SUPERFAMILY EGF/Laminin 293 326 - -
Accr8g01564 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Accr8g01564 742 Pfam Wall-associated kinase 165 275 IPR013695 GO:0004674|GO:0016020
Accr8g01564 742 FunFam Wall-associated receptor kinase 2 489 706 - -
Accr8g01564 742 SMART serkin_6 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01564 742 ProSiteProfiles EGF-like domain profile. 293 325 IPR000742 -
Accr8g01564 742 Gene3D Transferase(Phosphotransferase) domain 1 489 704 - -
Accr8g01564 742 ProSiteProfiles Protein kinase domain profile. 412 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01564 742 Pfam Wall-associated receptor kinase galacturonan-binding 29 91 IPR025287 GO:0030247
Accr8g01564 742 Pfam Protein kinase domain 413 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01564 742 SMART egfca_6 293 334 IPR001881 GO:0005509
Accr8g01564 742 Pfam Calcium-binding EGF domain 293 326 IPR001881 GO:0005509
Accr8g01564 742 CDD EGF_CA 293 324 - -
Accr8g01564 742 SUPERFAMILY Protein kinase-like (PK-like) 393 683 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01564 Accr-Chr8 37640355 37643541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01564 28 742 Receptor kinase-like Gene Family AT1G21230 45.442 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01564 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01564 - - vvi:100252663 787.719