Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01557 ATGGGTTTGTTGAGCTCACTGCATTTTAAACTGGCAGTGCTGGTCACCACCACAGCCGCTGCGCTGGCGGCGGCCGAAGCCCAGACGAAGCCAGGTTGCAACTATACGTGTGGGAACGTGAGCATCCCATATCCCTTTGGCACTAGCGAGAACTGCTACAGAGATGAAGATTTATATTTCTTCCTCAACTGCACAACCACCATTTCCCCATCATCTGGAGAAGCCACAACACAATTGTTTTCTGAAGATGTACAAGTTCTCAACATCTCCCTGGATCCTCCTGAATTGACCGTTTCCGGAGACGTATCCAAGCATTGCTATGGTTTCAACGATGATGTATCTGGGAATTGGATGATGTTCCCGAATTATTCTATATCAAACACAAAGAACAGATTCACTGTGGTGGGGTGTGACACCTACGCTTTCGTCGAGGACCTGAACGGCACGTTTACAACTGGCTGCGTGTCGAGTTGCAGTAAAGAGACGAGGTTTGAGGAAGCAGGGGCATGCTCTGGTGTGGGATGTTGCCAGACCAGTTTCCCCGAAACCATAAGGGACTATAATATCACCTTACTAAGCTTTAAGAATTACACGAAGGTGCGTGACTTCAACCCTTGCGGCTATGCGTTTATTGCCAAGAAAGGATCCTTCAACTTTTCAAAACGAGAGCTGCGTGATCTCAGCAACAGAACAGAATTTCCGGTGGTTCTGGATTGGGCTGTTCCCAATCAGACATGTCGTGAAGCCCAGAAAGATGCAAGGAGGTATGCCTGCAAGCAAAACAGTACATGTAAAGAGCCACGAAGTGGTATTGGGTACTACTGCGTATGTGAAGATGGTTTCAAAGGCAATCCCTATCTCGATACCGGCTGCAAAGATATTAATGAGTGCGATGGGGACAATCGTTGTAGTAGGATATGCCATAATGTCGATGGAAATTACACTTGTTCATGTCCATGGGGTTATGGAGGCGACGGCTATAAAGACAGGTCAGGCTGTAAGTCCCCCTTCAAAGAAATTTCACTAGGCATTTCTGTATGCTTTCTTGTTATCTTTACATTGGTCTCAACATTATGCTGGGGAAACAAGCAAAGAGCACTAAAGCAACTTAAAAGACAATATTTTGAGCGAAATGGAGGAAATTATCTGTTGCAGCTACTTCATCAACAACAAGGATACATTGATAGAACCAAAATTTTTACTGAAGATGAGCTCAAAATTGCCACAAACAACTTTCATGAGAGTAGAATTCTCGGTCATGGAGGACAAGGCACAGTTTACAAGGGCATATTACCAGATAACTCATTTGTTGCCATTAAAAAGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTATCAATGAAGTGACTGTACTTTCCCAAGTCAATCATAGAAATGTGGTTAAACTTTTTGGGTGTTGTCTTGAAACTGAAGTTCCCTTGTTGGTTTATGAATTTGTGGACAATGGCACCCTTTTTGATCGTATAGACCCACTAAAGAATGAGCACTCTCTTTCGTGGGAGACTCGATTAAGAATAGCTGCAGAAACAGCTGGGGCCATTTCATATTTACACTCTTCCGCTTCCATCCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAGATCACAATCATATGGCAAAGGTTTCTGACTTTGGAGCTTCAAGACTTATTCCTCTCGATGAAGCTCAAGTTTCTACTGTGGTTCAAGGGACATTAGGATATTTGGATCCAGAGTACCTCCTTACAGGTCAATTGAATGAGAAAAGTGACGTATATAGCTTTGGGGTTGTGCTTCTGGAGCTACTAACCGGGAAGAAACCATATGAATTCCTTAGGCTAGAACAGAAAAATTTGGCAACATACTTTGCATCATCAATGAAAGAAGGTAGCTTGTTGGAGGTTATTGACAAGCGAGTGTTGAATCAGAAGTATGTAGAGCAGCTACAGGAGGTTGCTTTCTTAGCAAGAAGGTGCATTAGAGTTCATGGAGAGAAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAAGGTCTAATTGCTATGAAAAGGCATTCTTGGGTAAAAGGAGAGGATATGATGTTTGAAGAACGTGAATGCTTGCTTGGTCATGCTGCTGCTAGCACTTCAGCTGGTTATGATGGTGCATATGGGAATGTTAGTGCTAACACTTTTGCTACTTATGATTGCATACAGAAGCAAATGGCATTTGAGATTGCAGATGGGCGATGA 2250 0.4289 MGLLSSLHFKLAVLVTTTAAALAAAEAQTKPGCNYTCGNVSIPYPFGTSENCYRDEDLYFFLNCTTTISPSSGEATTQLFSEDVQVLNISLDPPELTVSGDVSKHCYGFNDDVSGNWMMFPNYSISNTKNRFTVVGCDTYAFVEDLNGTFTTGCVSSCSKETRFEEAGACSGVGCCQTSFPETIRDYNITLLSFKNYTKVRDFNPCGYAFIAKKGSFNFSKRELRDLSNRTEFPVVLDWAVPNQTCREAQKDARRYACKQNSTCKEPRSGIGYYCVCEDGFKGNPYLDTGCKDINECDGDNRCSRICHNVDGNYTCSCPWGYGGDGYKDRSGCKSPFKEISLGISVCFLVIFTLVSTLCWGNKQRALKQLKRQYFERNGGNYLLQLLHQQQGYIDRTKIFTEDELKIATNNFHESRILGHGGQGTVYKGILPDNSFVAIKKSRVGGDSRQVKDFINEVTVLSQVNHRNVVKLFGCCLETEVPLLVYEFVDNGTLFDRIDPLKNEHSLSWETRLRIAAETAGAISYLHSSASIPIIHRDIKSANILLDHNHMAKVSDFGASRLIPLDEAQVSTVVQGTLGYLDPEYLLTGQLNEKSDVYSFGVVLLELLTGKKPYEFLRLEQKNLATYFASSMKEGSLLEVIDKRVLNQKYVEQLQEVAFLARRCIRVHGEKRPTMKEVATELEGLIAMKRHSWVKGEDMMFEERECLLGHAAASTSAGYDGAYGNVSANTFATYDCIQKQMAFEIADGR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01557 749 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 685 IPR045274 GO:0007166
Accr8g01557 749 ProSitePatterns Calcium-binding EGF-like domain signature. 293 316 IPR018097 GO:0005509
Accr8g01557 749 FunFam Wall-associated receptor kinase 2 382 488 - -
Accr8g01557 749 SMART egf_5 296 334 IPR000742 -
Accr8g01557 749 SMART egf_5 245 292 IPR000742 -
Accr8g01557 749 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 307 318 IPR000152 -
Accr8g01557 749 Gene3D Phosphorylase Kinase; domain 1 385 488 - -
Accr8g01557 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Accr8g01557 749 CDD EGF_CA 293 325 - -
Accr8g01557 749 FunFam Wall-associated receptor kinase 2 489 705 - -
Accr8g01557 749 SMART serkin_6 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01557 749 Gene3D Laminin 245 327 - -
Accr8g01557 749 SUPERFAMILY EGF/Laminin 293 323 - -
Accr8g01557 749 CDD STKc_IRAK 418 685 - -
Accr8g01557 749 ProSiteProfiles Protein kinase domain profile. 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01557 749 SUPERFAMILY Protein kinase-like (PK-like) 393 683 IPR011009 -
Accr8g01557 749 ProSiteProfiles EGF-like domain profile. 293 325 IPR000742 -
Accr8g01557 749 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Accr8g01557 749 SMART egfca_6 293 334 IPR001881 GO:0005509
Accr8g01557 749 Pfam Protein kinase domain 412 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01557 749 Gene3D Transferase(Phosphotransferase) domain 1 489 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01557 Accr-Chr8 37427107 37430579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01557 25 749 Receptor kinase-like Gene Family AT1G21230 46.980 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01557 Pkinase 4.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01557 - - vvi:100252663 734.947