Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01548 ATGGGTTTCTTGAACTCACTGCATTTGAAACTGGCATTGCTGGTCACCACGGCCGCGACGCTGGCTGCGGCGGAAGCCCAGACGAAAGCGGGTTGCAACTATACATGTGGGAACGTGAGCGTCCCATACCCGTTTGGCACTAGCGAGAACTGCTACAGAGATGAAACGTTCTTCCTCAACTGCAAAACCACCACGTCGCAACCATCTGGAGAAGCCACAACACAATTGTTTTGCGGTAATATACCAGTCCTCAACATCTCCCTGGATCCTCCTGAATTAACCGTCTCCCCAGGCGTTTCCTACGATTGCTATAATTCACGACATTCGTATTATAAGCTATGGTCCAACAACTTTTCTATATCAAGCACCAAGAACAGATTCACTGTGGTCGGCTGTGACACTTACGCTTACCTCAGTGACTTGAACAGCACGTTTAGCACTGGCTGCATGTTGAATTGCAGTAACGAGACGAGCTTTGAGAAAGCAGGGGAGTGCTCTGGTGTGGGATGCTGTCAGACCAGTTTCCCTCAAGCCATAAGGAACTATGCCATCACCTTAAGGAGCTATACCAAATACACGAAGGTGCATAACTTCAACCCATGTGGCTATGCTTTTGTTGCGAAGGAAGGATCCTTCAACTTCTCAAAACAAGAGCTGCTTCGTCTCAGCAACACAACATTTCCCATGGTTGTGGACTGGGCTGTTCCCAATCAGACATGCCCTGAAGCCCAGAAAGATGCAAGGAGCTATGCCTGCAAGCAAAACAGCAGATGTAACGACTCACTAAGTGGTATTGGGTACTACTGCGTATGTAAAGATGGTTTCAGAGGCAATCCCTATCTCGATACCGGCTGCAAAGATATCAATGAGTGCGATGGGGACAATCATTGCAGTAGGAAATGCCACAATGTCAATGGAAATTACACTTGTTCATGTCCATGGGGTTATAGAGGTGACGGCTATACAAACGGGTCAGGCTGCAAGTCCCCAATCAAAGAAATTTCACTAGGCATTTCTGTAGGCTTGCTTGTTATCTTTACATTGGTCTCCACATTATGTTGGGGAAACAAACAAAGAGCACTAAAACAACTTAGAAGACAATATTTTGAGCACAATGGAGGAAATTATATGCTGCAACAACTTCATCAACAACAAGGATACACTGATAGAACCAAAATTTTCACTGAAGATGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGCAGAATTCTCGGTCGTGGAGGACAAGGCACAGTTTACAAGGGCATATTACCAGATAACTCACTTGTTGCCATTAAAAGGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTGTCAATGAAGTGACTGTACTTTCCCATATCAACCATAGGAATGTGGTTAAACTTTTTGGATGTTGTCTTGAAACTGAAGTTCCCTTGTTAGTTTATGAGTTTGTAGACAATGGCACCCTTCTTGACCATATAGACCCACTAAAGAATGAGCACTCTCTTTCGTGGGAGACTCGATTAAGAATAGCTGCAGAAACAGCCGAGGCCATTTCATATTTACACTCTTCTGCTTCTATTCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAGATCACAATCATATAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCAATGAAACTCAAGTTTCTACTGTAGTTCAAGGGACATTAGGATATTTGGACCCAGAGTACCTACTTACAGGTGAACTAAATGAGAAAAGTGACGTATATAGCTTTGGGGTTGTGCTTGCGGAGCTAATCACTGGGAATAAAGCGGTTGAATTCAATAGGTCAGAGCAGAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTATGGCAGATTCTTGACAATCGAGTGTTAGATCAGAAGAATGCAGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGGAGGTGCATTAGAATGAATGGGGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAAGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAAGGAGGGGATATGATGTCTGAAGAATGTGAATGTTTGCTTGGTCATGTGGCTGATGGATATGGGAATGCTAGTGCTAGCACTACAGCAGCCTATGATAGCATCCAAAAACAGTTAGCATTTGAGATTGAAGATGGGCGATGA 2208 0.4312 MGFLNSLHLKLALLVTTAATLAAAEAQTKAGCNYTCGNVSVPYPFGTSENCYRDETFFLNCKTTTSQPSGEATTQLFCGNIPVLNISLDPPELTVSPGVSYDCYNSRHSYYKLWSNNFSISSTKNRFTVVGCDTYAYLSDLNSTFSTGCMLNCSNETSFEKAGECSGVGCCQTSFPQAIRNYAITLRSYTKYTKVHNFNPCGYAFVAKEGSFNFSKQELLRLSNTTFPMVVDWAVPNQTCPEAQKDARSYACKQNSRCNDSLSGIGYYCVCKDGFRGNPYLDTGCKDINECDGDNHCSRKCHNVNGNYTCSCPWGYRGDGYTNGSGCKSPIKEISLGISVGLLVIFTLVSTLCWGNKQRALKQLRRQYFEHNGGNYMLQQLHQQQGYTDRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGILPDNSLVAIKRSRVGGDSRQVKDFVNEVTVLSHINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEHSLSWETRLRIAAETAEAISYLHSSASIPIIHRDIKSANILLDHNHIAKVSDFGASRLVPLNETQVSTVVQGTLGYLDPEYLLTGELNEKSDVYSFGVVLAELITGNKAVEFNRSEQRNLAMYFASSMKEDNLWQILDNRVLDQKNAEQLKEVAFLARRCIRMNGEERPTMKEVATELEGLIAMKKHPWVKGGDMMSEECECLLGHVADGYGNASASTTAAYDSIQKQLAFEIEDGR 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01548 735 SMART serkin_6 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01548 735 SUPERFAMILY Growth factor receptor domain 238 317 IPR009030 -
Accr8g01548 735 FunFam Fibrillin 2 286 323 - -
Accr8g01548 735 ProSitePatterns Calcium-binding EGF-like domain signature. 287 310 IPR018097 GO:0005509
Accr8g01548 735 FunFam Wall-associated receptor kinase 2 376 482 - -
Accr8g01548 735 SMART egfca_6 287 328 IPR001881 GO:0005509
Accr8g01548 735 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Accr8g01548 735 CDD EGF_CA 287 319 - -
Accr8g01548 735 Pfam Protein kinase domain 407 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01548 735 SUPERFAMILY Protein kinase-like (PK-like) 387 673 IPR011009 -
Accr8g01548 735 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 679 IPR045274 GO:0007166
Accr8g01548 735 FunFam Wall-associated receptor kinase 2 483 699 - -
Accr8g01548 735 CDD STKc_IRAK 412 679 - -
Accr8g01548 735 FunFam Wall-associated receptor kinase 2 238 285 - -
Accr8g01548 735 SMART egf_5 290 328 IPR000742 -
Accr8g01548 735 SMART egf_5 239 286 IPR000742 -
Accr8g01548 735 ProSiteProfiles Protein kinase domain profile. 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01548 735 ProSiteProfiles EGF-like domain profile. 287 322 IPR000742 -
Accr8g01548 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Accr8g01548 735 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
Accr8g01548 735 Pfam Wall-associated receptor kinase galacturonan-binding 32 94 IPR025287 GO:0030247
Accr8g01548 735 Gene3D Laminin 242 322 - -
Accr8g01548 735 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 301 312 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01548 Accr-Chr8 37178364 37184388 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01548 4 735 Receptor kinase-like Gene Family AT1G21230 46.042 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01548 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01548 - - pcin:129293718 785.023