Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01546 ATGGGTTTGTTGAACTCCATTCATTTTACCCTGGCATTGCTGGTCACCACGGCCGTCGCGGCGGCGGCGGCCGAAGCCCAGACGAAACCGGACTGCAACTATACGTGTGGAAACGTGAGCGTCCCATATCCCTTTGGCACTAGCGAGAACTGCTACTACAGAGATGAAGATTTAAATTTCTTCCTCAACTGCACGACCACCACTTCTCCATCATCATCTGGAGAAGCCACAACAACACAATTGTTTTGGAGCGAAAATCTACCAGTCCTAAGCATCTCCCTGGATCCTCCTGAATTAACCGTCTCCCCAGACGTTTCCTACCATTGCTATGATTCAAGCAATTGGTATAATTGGGTAGACTTGGGTAAGTTTTCTGTATCAAACACGGAGAACAGATTCACTGTGGTGGGCTGTGACACCTACGCTTACTTCAGTGACATGAACAGCACTTTTAGCACTGGCTGCTCGTTGAAATGCAGTGACGAGACGAGGTTTGAGGAAGCAGGGGCATGCTCTGGTGTGGGATGCTGTCAGACCAGTTTCCCTCAAGCCATAAGGAACTATGACATCACCTTACAGAGCTTTAACAATTACACGATGGTGCGTGACTTCAACCCATGTGGCTATGCGTTTTTTGCCAAGGAAGGATCCTTCAACTTCTCAAAACGAGAGCTGCTTAATCTCAGCAACACAACACAATTTCCCATGGTTGTGGACTGGGCTGTTTCCAATCAGACATGCCCTGAAGCCAAGAAAGATGCAAAGAGCTATGCCTGCAAGCAAAACAGTAGATGTAAAGAGTCAGTAAGTCGTATTGGGTACTACTGCGTATGTGAAGATGGTTTCAGAGGCAATCCCTATCTCGATACCGGCTGCAAAGATATCAACGAGTGCGATGGGGACAATCATTGCAGTAGGAAATGCCACAATGTCAATGGAAATTACACTTGTTCATGTCCATGGGGTTATAGAGGTGACGGCTATACAAACGGGTCAGGCTGCAAGTCCCCAATCAAAGAAATTTCACTAGGCATTTCTGTAGGCTTGCTTGTTATCTTTACATTGGTCTCCACATTATGTTGGGGAAACAAACAAAGAGCACTAAAACAACTTAGAAGACAATATTTTGAGCACAATGGAGGAAATTATATGCTGCAACAACTTCATCAACAACAAGGATACACTGATAGAACCAAAATTTTCACTGAAGATGAGCTCAAAATTGCCACAAACAACTTTGATGAGAGCAGAATTCTCGGTCGTGGAGGACAAGGCACAGTTTACAAGGGCATATTACCAGATAACTCACTTGTTGCCATTAAAAGGTCCAGAGTAGGAGGTGACTCAAGACAAGTTAAGGATTTTGTCAATGAAGTGACTGTACTTTCCCAAATCAACCATAGGAATGTGGTTAAACTTTTTGGATGTTGTCTTGAAACTGAAGTTCCCTTGTTAGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGACCATATAGACCCACTAAAGAATGAGCACTCTCTTTCGTGGGAGACTCGATTAAGAATAGCTGCAGAAACAGCCGAGGCCATTTCATATTTACACTCTTCTGCTTCGATTCCAATTATTCATCGTGATATTAAATCTGCCAACATACTATTAGATCACAATCATATAGCAAAAGTTTCTGACTTTGGAGCTTCAAGACTTGTTCCTCTCAATGAAACTCAAGTTTCTACTGTAGTTCAAGGGACATTAGGATATTTGGACCCAGAGTACCTACTTACAGGTGAACTAAATGAGAAAAGTGACGTATATAGCTTTGGGGTTGTGCTTGCGGAGCTAATCACTGGGAATAAAGCGGTTGAATTCAATAGGTCAGAGCAGAGAAATTTGGCTATGTACTTTGCATCTTCAATGAAAGAAGACAACTTATGGCAGATTCTTGACAATCGAGTGTTAGATCAGAAGAATGCAGAGCAATTAAAGGAGGTTGCTTTCTTAGCAAGGAGGTGCATTAGAATGAATGGGGAGGAAAGGCCAACTATGAAAGAAGTAGCAACAGAATTAGAAGGTCTAATTGCTATGAAAAAGCATCCTTGGGTAAAAGGAGGGGATATGATGTCTGAAGAATGTGAATGTTTGCTTGGTCATGTGGCTGATGGATATGGGAATGCTAGTGCTAGCACTTTAGCAGCCTATGATAGCATCCAGAAACAGTTAGCATTTGAGATTGAAGATGGGCGATGA 2229 0.4302 MGLLNSIHFTLALLVTTAVAAAAAEAQTKPDCNYTCGNVSVPYPFGTSENCYYRDEDLNFFLNCTTTTSPSSSGEATTTQLFWSENLPVLSISLDPPELTVSPDVSYHCYDSSNWYNWVDLGKFSVSNTENRFTVVGCDTYAYFSDMNSTFSTGCSLKCSDETRFEEAGACSGVGCCQTSFPQAIRNYDITLQSFNNYTMVRDFNPCGYAFFAKEGSFNFSKRELLNLSNTTQFPMVVDWAVSNQTCPEAKKDAKSYACKQNSRCKESVSRIGYYCVCEDGFRGNPYLDTGCKDINECDGDNHCSRKCHNVNGNYTCSCPWGYRGDGYTNGSGCKSPIKEISLGISVGLLVIFTLVSTLCWGNKQRALKQLRRQYFEHNGGNYMLQQLHQQQGYTDRTKIFTEDELKIATNNFDESRILGRGGQGTVYKGILPDNSLVAIKRSRVGGDSRQVKDFVNEVTVLSQINHRNVVKLFGCCLETEVPLLVYEFVDNGTLLDHIDPLKNEHSLSWETRLRIAAETAEAISYLHSSASIPIIHRDIKSANILLDHNHIAKVSDFGASRLVPLNETQVSTVVQGTLGYLDPEYLLTGELNEKSDVYSFGVVLAELITGNKAVEFNRSEQRNLAMYFASSMKEDNLWQILDNRVLDQKNAEQLKEVAFLARRCIRMNGEERPTMKEVATELEGLIAMKKHPWVKGGDMMSEECECLLGHVADGYGNASASTLAAYDSIQKQLAFEIEDGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01546 742 SUPERFAMILY Growth factor receptor domain 243 324 IPR009030 -
Accr8g01546 742 FunFam Wall-associated receptor kinase 2 490 706 - -
Accr8g01546 742 Gene3D Phosphorylase Kinase; domain 1 383 489 - -
Accr8g01546 742 FunFam Wall-associated receptor kinase 2 383 489 - -
Accr8g01546 742 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 686 IPR045274 GO:0007166
Accr8g01546 742 Pfam Wall-associated receptor kinase galacturonan-binding 32 100 IPR025287 GO:0030247
Accr8g01546 742 SUPERFAMILY Protein kinase-like (PK-like) 394 680 IPR011009 -
Accr8g01546 742 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Accr8g01546 742 Gene3D Transferase(Phosphotransferase) domain 1 490 698 - -
Accr8g01546 742 SMART egfca_6 294 335 IPR001881 GO:0005509
Accr8g01546 742 SMART egf_5 246 293 IPR000742 -
Accr8g01546 742 SMART egf_5 297 335 IPR000742 -
Accr8g01546 742 FunFam Fibrillin 2 293 330 - -
Accr8g01546 742 CDD STKc_IRAK 419 686 - -
Accr8g01546 742 SMART serkin_6 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01546 742 SUPERFAMILY EGF/Laminin 294 327 - -
Accr8g01546 742 ProSiteProfiles EGF-like domain profile. 294 329 IPR000742 -
Accr8g01546 742 ProSitePatterns Calcium-binding EGF-like domain signature. 294 317 IPR018097 GO:0005509
Accr8g01546 742 Gene3D Laminin 246 329 - -
Accr8g01546 742 FunFam Wall-associated receptor kinase 2 245 292 - -
Accr8g01546 742 CDD EGF_CA 294 326 - -
Accr8g01546 742 Pfam Protein kinase domain 414 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01546 742 ProSiteProfiles Protein kinase domain profile. 413 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01546 742 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 308 319 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01546 Accr-Chr8 37129086 37133429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01546 9 742 Receptor kinase-like Gene Family AT1G21230 45.971 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Accr8g01546 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01546 - - pcin:129293718 774.237