Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01540 ATGCCAAGTTCTAGAGCCTCATCAGAGAAGAAAACCCAGATGGGTTTGTTTCTTCAAACCAACCCATCTTCCTTTGGTGAACAGAGAAGAGGAAGAAGAAAGCAAGGAGAAGCAGGGAGGTTTCTGGGAGTGAGAAGAAGACCTTGGGGAAGATATGCTGCAGAAATTAGAGACCCAACAACTAAAGAAAGACACTGGCTTGGCACCTTTGATACTGCTCAAGAAGCTGCTTTAGCTTATGACAGAGCTGCTTTGTCCATTAAAGGAAGCCAAGCAAGAACCAACTTTGTTTACACTGACATTAACACAACCTTTGGCAATACTCTTCTCTGTCCCTTTGATGATGTTCATCAGCTTCAGTCACTCTTTAACACTCCTCAGATGAAACAGTCAACAACCAATCAGAACAGCCCACCTCAGCTTTCTGAGACGACGACTACTACTACTACTACTGTTTCGGCATGTGATCATCCTTCTTCTTCTTCTTCTTCAGCTCAGGAGGGTGGTGATAACAACTTGTTCTTCTTCTCCAATGATGATTCTAAATCAGGTTACTTGGAATGCATAGTTCCTGATATCTGTTTTAGACCCTCTTCTTCTTCTTCTTCCAATGATACCAACAATGCCTTAATTCCCTGTGCTGAAGAAACAAGTGACCAAAAGATAACTCAAGAAGCTGTGAAGAACATGGCCTCACCAAGCTCTGGAGATTTCACTTACCCAACTTATGAACTTGGTCAAGCAACAATCTGGGATTGGAGCTGCAGTGAACTTGCTGCTATATTTAACAGTCCATTGAAAGTTGAAGATACAGACAGTTCTATCTGTGGGATATTGTCTCAACCTGCTGCTACTTCATCAGCCAATTATGTTCAATCACTTCCTTCATTGGATGTTGATTTCTCTTACACACTCTTCTGA 921 0.4202 MPSSRASSEKKTQMGLFLQTNPSSFGEQRRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSIKGSQARTNFVYTDINTTFGNTLLCPFDDVHQLQSLFNTPQMKQSTTNQNSPPQLSETTTTTTTTVSACDHPSSSSSSAQEGGDNNLFFFSNDDSKSGYLECIVPDICFRPSSSSSSNDTNNALIPCAEETSDQKITQEAVKNMASPSSGDFTYPTYELGQATIWDWSCSELAAIFNSPLKVEDTDSSICGILSQPAATSSANYVQSLPSLDVDFSYTLF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01540 306 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Accr8g01540 306 MobiDBLite consensus disorder prediction 1 37 - -
Accr8g01540 306 SUPERFAMILY DNA-binding domain 41 97 IPR016177 GO:0003677
Accr8g01540 306 MobiDBLite consensus disorder prediction 1 26 - -
Accr8g01540 306 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 211 - -
Accr8g01540 306 Pfam AP2 domain 43 89 IPR001471 GO:0003700|GO:0006355
Accr8g01540 306 FunFam Ethylene-responsive transcription factor 2 40 98 - -
Accr8g01540 306 MobiDBLite consensus disorder prediction 127 168 - -
Accr8g01540 306 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Accr8g01540 306 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Accr8g01540 306 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Accr8g01540 306 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Accr8g01540 306 CDD AP2 40 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01540 Accr-Chr8 37061555 37062475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01540 11 197 AP2-EREBP Transcription Factor Family AT5G18560 44.348 4.97e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g01540 AP2 3.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01540 - - pcin:129309284 380.178