Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01536 ATGGAATCGAATCGCCAGCGAACGACTCGGCGAAGGAGGAGGCAGAAGGAGCTGGTGAGGAAAGTACTTTGGCCTTCAATTCGGGGCCATTCTTGTTCGATTTGTTTCAGAAACCTCGAAGTTCATTATAAAGAAGCCGCGATTCTCTCGGTGTGTATGCACGCCTACTGCATCCAATGTATTCGCCAATGGAGTGGCTTGAAAAGAAAGTGTCCTCTTTGTAATGCAAACTTCAGCTCCTGGTTCTGTAAGCTTAGTCTTTCCTCAGGAGAGTTCCAGAAAGAGGAGTTGCCCTTGGAGGGTTTCTCCAGAAATTCTCATCAAGAAATCACCTCAAGCCGTCTAGATGGTCCTAGACTTCTTCGTAGAGCAAGAGTTGCTTTAGATGAAAGGCGAAATAGGGCACTGCCATGGCGGCGATCATTTGGACGTCCTGGACACGCGAGTCCAGAAGTTATTGCTCAAAGGAAACTTGATTGGCGTGCAAGCATATACAAGAAGCAGCTGAAGGCTGTTCCTTTAACCTCTAGCGATCTTGAGCAGATTAATCCAAGAAATAATTTTCAAAGAGAAAAAACACTCCAAAAGATTGAGCCATGGATACGGAGGGAGCTACAAGCGGTGCTTGGTGACCCAGATCCAACAGTCATAGTTCTTGTGGCAACCTCACAGTACTCTGCATGGCTGGAAGAGAAAGTTAGTTGTGGACAGTTTGATGATGAAGAGAGGTTTATATCACCCCTGCGTCCTTTCCTGCAAGATAAAGCCAGGATCTTTTGGCATGAACTAAGGTGTTATGCTGAGAGCTCTTACAATATTGAAACATATGATGCTGTAGTTGAATATAAAAAACTGGAGTGA 861 0.4518 MESNRQRTTRRRRRQKELVRKVLWPSIRGHSCSICFRNLEVHYKEAAILSVCMHAYCIQCIRQWSGLKRKCPLCNANFSSWFCKLSLSSGEFQKEELPLEGFSRNSHQEITSSRLDGPRLLRRARVALDERRNRALPWRRSFGRPGHASPEVIAQRKLDWRASIYKKQLKAVPLTSSDLEQINPRNNFQREKTLQKIEPWIRRELQAVLGDPDPTVIVLVATSQYSAWLEEKVSCGQFDDEERFISPLRPFLQDKARIFWHELRCYAESSYNIETYDAVVEYKKLE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01536 286 SMART ring_2 32 74 IPR001841 -
Accr8g01536 286 ProSiteProfiles Zinc finger RING-type profile. 32 75 IPR001841 -
Accr8g01536 286 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 11 284 - -
Accr8g01536 286 Pfam Ring finger domain 31 75 IPR001841 -
Accr8g01536 286 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 90 IPR013083 -
Accr8g01536 286 SUPERFAMILY RING/U-box 27 81 - -
Accr8g01536 286 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01536 21 263 C3H Transcription Factor Family AT2G39100 46.825 1.02e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01536 - - pcin:129308821 403.29