Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01530 ATGGATGACAAGGAGGACAGTGGGGTAAAGAAGGAAGCGGTCAAGAACGATTACCGTAAAGAAGGTTCAGCTGCTCAGTCTCATCACGTCAATAGGGTTAGCTCAGTTCAAAAGGATGGAACAGGTGGGCACATTGCTGCACAAACTTTTACATTTCGGGAGCTTGCAGCTGCTACAAGGAATTTCAGTCCTGAATGTTTATTAGGCGAAGGTGGTTTTGGTCGTGTTTATAAAGGCCACCTTGAAAGCACAGGGCAAGTTGTTGCTGTAAAACAGTATGACCGCAATGGCTTTCAAGGAAATCGAGCGTTCTTGGTGGAGGTACTCATGCTTAGCATCTTGCATCACCCAAATCTTGTGAGCTTAATCGGTTATTGTGCTGATGGAGATCAGCGGCTGCTTGTCTATGAATTTATGCCTTTGGGGTCTCTGGGGGATCACCTACATGATCTTCCTCCTGACAAGGAGCCTCTGGACTGGAATACAAGGATGAAAATAGCAGCTGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCTCCTGTAATATATAGAGACCTAAAATCATCAAATATCCTGCTAGATGAGGGTTTTCATCCCAAGTTATCAGATTTTGGGCTGGCAAAACTTGGTCCAGTAGGCGATAAGACTCATGTATCAACCCGAGTAATGGGGACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGACAACTGACTCTGAAGTCTGATGTCTACAGCTTTGGAGTTGTGTTACTGGAACTCATTACTGGGCGCAAGGCTATCGATAATACACATTCACATGGCCAGCATCTTGTGGCGTGGGCACGACCTCTGTTTAAAGACGAGGGGAAGTTCCCCACAGCGGCTGATCCTCTGCTTCATGGCCGTTATCCAATGGAAGGACTCTATCAAGCACTTGCAGTTGCAGACATGTGTTTGCAAGAACAAGCTGCTACAAGACCTCCTATTGGAGATGTTGTGACGGCTCTTACATCCTTGGCCTCACAGACATATGACCCAAATGGATCTGATCATACTAGCCGAGTTGGTCCATCAACCCGTAGGAGCAAGGAGGATCGGAAGAACTTGGCAGATGGCTCGGACAGCCCTGATCATGGCCGAGTTGTTGCTACAGATGAGTGA 1158 0.4689 MDDKEDSGVKKEAVKNDYRKEGSAAQSHHVNRVSSVQKDGTGGHIAAQTFTFRELAAATRNFSPECLLGEGGFGRVYKGHLESTGQVVAVKQYDRNGFQGNRAFLVEVLMLSILHHPNLVSLIGYCADGDQRLLVYEFMPLGSLGDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLELITGRKAIDNTHSHGQHLVAWARPLFKDEGKFPTAADPLLHGRYPMEGLYQALAVADMCLQEQAATRPPIGDVVTALTSLASQTYDPNGSDHTSRVGPSTRRSKEDRKNLADGSDSPDHGRVVATDE 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01530 385 MobiDBLite consensus disorder prediction 341 385 - -
Accr8g01530 385 Gene3D Transferase(Phosphotransferase) domain 1 139 354 - -
Accr8g01530 385 MobiDBLite consensus disorder prediction 355 385 - -
Accr8g01530 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Accr8g01530 385 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01530 385 FunFam Serine/threonine-protein kinase PBS1 139 353 - -
Accr8g01530 385 Gene3D Phosphorylase Kinase; domain 1 32 138 - -
Accr8g01530 385 MobiDBLite consensus disorder prediction 1 26 - -
Accr8g01530 385 ProSiteProfiles Protein kinase domain profile. 62 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01530 385 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Accr8g01530 385 PANTHER OS07G0668900 PROTEIN 25 346 - -
Accr8g01530 385 Pfam Protein kinase domain 67 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g01530 385 CDD STKc_IRAK 68 338 - -
Accr8g01530 385 FunFam Serine/threonine-protein kinase PBS1 35 138 - -
Accr8g01530 385 SUPERFAMILY Protein kinase-like (PK-like) 47 338 IPR011009 -
Accr8g01530 385 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01530 Accr-Chr8 36960008 36965083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01530 43 348 Glycoside Hydrolase AT3G07070 71.336 5.93e-159 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Accr8g01530 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01530 - - vvi:100249446 627.091