Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr8g01501 | ATGGGGAAGACCAGGAAATGGCTTAGAAACTTGATGTCCCCGAAGAACCACAAGGACAAAGAAAAGGGACAATGTGGAGATCATCAGATTCCTCCTTCTTCAACAAGTGCCTCTGAAATTCCAACCCCAAAAGAGAAACGAAGATGGAGTTTCCGTAGGCCATCAGATTCCAAACAACTCAATAATTCTGCAGAAACCAATGTGACTGCCTCACCGACACCACCAACCGCCACAGATGTTGATCAGAATTTGCAGGACAACAATCACTTGGCTATTATCACTGAAGAAGCTGCTGCTATTAAAATTCAATCTGTCTTTCGGTCTTACTTGGCAAGAAAAGCATTAAATGCTCTGAGAGGAATAGTAAAGTTGCAGGCATTAGTAAGGGGACAATTAGTGAGAAAACAGGCTTCGGCTACTCTAAGATGCATGGAAGCTTTATTTTCAGCACAAGCCAGAGCTTGTGCTCTGAGGATCAGAATGGCATCAGAACCAAAGTCTAATCAGAGACACTCAACTATAACAAGGCATGTGTATGACTTTGATGATGAAACTGACATGGAAACGGAAGAGAACATAAGAATTGTGAAGGTGGATGTTTCTGGATCAAGGGAAAATGGCAGAAACAGAAAAGAAGAAAACCACAAGGTATCTCCAGCCATATCAGGACAAAGCAGCCCTGCATCATCGAAACCTGAAGAAAAGAAGCTTTCTTTTACTTCCCCAGTCCCAAATTACATGGCCAACACAGAATCATCAAGGGCCAAATTCAGATCACTAAGTGCACCTAAGCAAAGACCAGACACAGTTGAGAGGCAATTAAGCCGTCCTAGAGCTTCAATGGAAGCAAGAAATAGTAGTCACAAGCCAGTAATGAAGATGAGAAGGTCATCTTCACATGTAGGTTCTAATGCTCATCACTATCAATACCCAAACTCAATCAAGCTTGACAGGTCCTCTGTTTCACTGATAGAAAGTGAGTGTGGTTCTACCAGCACAGTCCTCACAAATACTCAGTATTGCAGATCTCTGGTTTCATATGATCCTCATGAAGGTAGGTACTACTACTGA | 1071 | 0.4239 | MGKTRKWLRNLMSPKNHKDKEKGQCGDHQIPPSSTSASEIPTPKEKRRWSFRRPSDSKQLNNSAETNVTASPTPPTATDVDQNLQDNNHLAIITEEAAAIKIQSVFRSYLARKALNALRGIVKLQALVRGQLVRKQASATLRCMEALFSAQARACALRIRMASEPKSNQRHSTITRHVYDFDDETDMETEENIRIVKVDVSGSRENGRNRKEENHKVSPAISGQSSPASSKPEEKKLSFTSPVPNYMANTESSRAKFRSLSAPKQRPDTVERQLSRPRASMEARNSSHKPVMKMRRSSSHVGSNAHHYQYPNSIKLDRSSVSLIESECGSTSTVLTNTQYCRSLVSYDPHEGRYYY | 356 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr8g01501 | 356 | SMART | iq_5 | 117 | 138 | IPR000048 | GO:0005515 | |
| Accr8g01501 | 356 | SMART | iq_5 | 94 | 116 | IPR000048 | GO:0005515 | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 192 | 217 | - | - | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
| Accr8g01501 | 356 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 288 | - | - | |
| Accr8g01501 | 356 | Pfam | IQ calmodulin-binding motif | 119 | 136 | IPR000048 | GO:0005515 | |
| Accr8g01501 | 356 | Pfam | IQ calmodulin-binding motif | 97 | 115 | IPR000048 | GO:0005515 | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 192 | 293 | - | - | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 218 | 259 | - | - | |
| Accr8g01501 | 356 | Pfam | Protein of unknown function (DUF4005) | 226 | 292 | IPR025064 | - | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 55 | 79 | - | - | |
| Accr8g01501 | 356 | ProSiteProfiles | IQ motif profile. | 119 | 146 | IPR000048 | GO:0005515 | |
| Accr8g01501 | 356 | Gene3D | - | 94 | 146 | - | - | |
| Accr8g01501 | 356 | MobiDBLite | consensus disorder prediction | 12 | 26 | - | - | |
| Accr8g01501 | 356 | ProSiteProfiles | IQ motif profile. | 95 | 123 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr8g01501 | Accr-Chr8 | 36452030 | 36453422 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr8g01501 | 1 | 344 | IQD Protein Family | AT4G14750 | 44.845 | 8.00e-75 | 236 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr8g01501 | - | - | pcin:129307883 | 469.159 |