Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01500 ATGGGGAAGACCAGGAAATGGCTTAGAAACTTGATGTCCCCGAAGAACCACAAGGACAAAGAAAAGGGACAATGTGGAGATCATCAGATTCCTCCTTCTTCAACAAGTGCCTCTGAAATTCCAACCCCAAAAGAGAAACGAAGATGGAGTTTCCGTAGGCCATCAGATTCCAAACAACTCAATAATTCTGCAGAAACCAATGTGACTGCCTCACCGACACCACCAACCGCCACAGATGTTGATCAGAATTTGCAGGACAACAATCACTTGGCTATTATCACTGAAGAAGCTGCTGCTATTAAAATTCAATCTGTCTTTCGGTCTTACTTGGCAAGAAAAGCATTAAATGCTCTGAGAGGAATAGTAAAGTTGCAGGCATTAGTAAGGGGACAATTAGTGAGAAAACAGGCTTCGGCTACTCTAAGATGCATGGAAGCTTTATTTTCAGCACAAGCCAGAGCTTGTGCTCTGAGGATCAGAATGGCATCAGAACCAAAGTCTAATCAGAGACACTCAACTATAACAAGGCATGTGTATGACTTTGATGATGAAACTGACATGGAAACGGAAGAGAACATAAGAATTGTGAAGGTGGATGTTTCTGGATCAAGGGAAAATGGCAGAAACAGAAAAGAAGAAAACCACAAGGTATCTCCAGCCATATCAGGACAAAGCAGCCCTGCATCATCGAAACCTGAAGAAAAGAAGCTTTCTTTTACTTCCCCAGTCCCAAATTACATGGCCAACACAGAATCATCAAGGGCCAAATTCAGATCACTAAGTGCACCTAAGCAAAGACCAGACACAGTTGAGAGGCAATTAAGCCGTCCTAGAGCTTCAATGGAAGCAAGAAATAGTAGTCACAAGCCAGTAATGAAGATGAGAAGGTCATCTTCACATAAAGTGAGTGTGGTTCTACCAGCACAGTCCTCACAAATACTCAGTATTGCAGATCTCTGGTTTCATATGATCCTCATGAAGGTAGGTACTACTACTGACAAGGGCAACAAGGTATGTTCCTGCATTTTAGAGCTGGAGTTGAACCGTGTTCTTACAAAATCCATGGAAGCTGTGGTGAAGTTTAACTTCCATAGACTTGTTCTTTATGATAAATTATGTAATTAA 1125 0.4178 MGKTRKWLRNLMSPKNHKDKEKGQCGDHQIPPSSTSASEIPTPKEKRRWSFRRPSDSKQLNNSAETNVTASPTPPTATDVDQNLQDNNHLAIITEEAAAIKIQSVFRSYLARKALNALRGIVKLQALVRGQLVRKQASATLRCMEALFSAQARACALRIRMASEPKSNQRHSTITRHVYDFDDETDMETEENIRIVKVDVSGSRENGRNRKEENHKVSPAISGQSSPASSKPEEKKLSFTSPVPNYMANTESSRAKFRSLSAPKQRPDTVERQLSRPRASMEARNSSHKPVMKMRRSSSHKVSVVLPAQSSQILSIADLWFHMILMKVGTTTDKGNKVCSCILELELNRVLTKSMEAVVKFNFHRLVLYDKLCN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01500 374 SMART iq_5 117 138 IPR000048 GO:0005515
Accr8g01500 374 SMART iq_5 94 116 IPR000048 GO:0005515
Accr8g01500 374 MobiDBLite consensus disorder prediction 192 217 - -
Accr8g01500 374 MobiDBLite consensus disorder prediction 1 79 - -
Accr8g01500 374 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Accr8g01500 374 Pfam IQ calmodulin-binding motif 97 115 IPR000048 GO:0005515
Accr8g01500 374 MobiDBLite consensus disorder prediction 218 259 - -
Accr8g01500 374 MobiDBLite consensus disorder prediction 55 79 - -
Accr8g01500 374 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Accr8g01500 374 MobiDBLite consensus disorder prediction 192 296 - -
Accr8g01500 374 PANTHER IQ-DOMAIN 5-RELATED 1 290 - -
Accr8g01500 374 MobiDBLite consensus disorder prediction 12 26 - -
Accr8g01500 374 Pfam Protein of unknown function (DUF4005) 226 290 IPR025064 -
Accr8g01500 374 Gene3D - 94 146 - -
Accr8g01500 374 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01500 Accr-Chr8 36452030 36453549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01500 1 299 IQD Protein Family AT4G14750 43.114 1.78e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01500 - - pcin:129307883 387.497