Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01462 ATGATGAACGGAGGCGGAAGGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTGGAACATCAAGCTCTCATTTTCAAGTACATGGCTTCTGGTATTCCCATTCCTCCTGATCTCGTCTTCTCCATCAAAAGAGCCTCTCTTGACTCTCCTCTTTCCTCAAGGCTCTTGTCTCTCCCTTCTCATCAACACTTTGGGTGGAACTACTTGGAGATGGGCTTGGGGAGGAAGATAGACACAGAACCAGGGAGATGCAGAAGAACAGATGGGAAAAAATGGAGGTGCTCTAAAGAAGCTTACCCAAATTCAAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTGCAACAGCATCAACAACAACAAGGTTTCAAAACAACAACGTTAACCCCACCTCCTAACAACAACAAAAATTCCTTAACAGTTACAAAAAGTAGCAACACTACTCCTCCTTCACTACTCTCCCTCACCACCACCGCACCTCTCTCTGATACCACCACCCACAATCATCATCATCATCATTCCTTCCTCTATAATCATCACCACCAACCTTCATCAAGATCTCCTTCATCTGGTTTCAGCTTCTCTTTACAAGATGATAGTGCTCCTCATCACTTGAACAGCGGTTATGTTTATGATGGGCTGAGAGAAGATGTGGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACGATGAGAAGCTTCTCTGCTTCATCAATGGAAGATACTTCATGGCATCTAACGCCACTCTCGATGAGCTCATCGTCTTCTTCCTCCATGAAACAGAGGAGCAGCTACTCTGGTTTGTCCCCCACCGAGTACTCTTCTTACTTGCAGCTTCAAAAGCAAAACCCTAACGAAAGTAGGAACCAGCAAGGTCAAGATTGTTACCTGCTGGGTCTGGGGAAACCACAAGAAGAACCTAATCATAATCAGAATCAGAAAACTGTTCATCGCTTCTTCGACGAATGGCCCAACAAAAGCAAAAACTCGTGGCTTGATCTTGACGATAAATCATCCACCACCCAGCTTTCGATTTCCATTCCCTCCACCACCACGGACTCTGATCACGACCATTTTCCAGGCTTCAATTTTAGAACCCACCAAGATGTCTGA 1137 0.4547 MMNGGGRNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLDSPLSSRLLSLPSHQHFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQHQQQQGFKTTTLTPPPNNNKNSLTVTKSSNTTPPSLLSLTTTAPLSDTTTHNHHHHHSFLYNHHHQPSSRSPSSGFSFSLQDDSAPHHLNSGYVYDGLREDVDEHAFFTEPSGTMRSFSASSMEDTSWHLTPLSMSSSSSSSMKQRSSYSGLSPTEYSSYLQLQKQNPNESRNQQGQDCYLLGLGKPQEEPNHNQNQKTVHRFFDEWPNKSKNSWLDLDDKSSTTQLSISIPSTTTDSDHDHFPGFNFRTHQDV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01462 378 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr8g01462 378 ProSiteProfiles WRC domain profile. 80 124 IPR014977 -
Accr8g01462 378 Pfam WRC 82 121 IPR014977 -
Accr8g01462 378 MobiDBLite consensus disorder prediction 121 172 - -
Accr8g01462 378 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr8g01462 378 MobiDBLite consensus disorder prediction 355 378 - -
Accr8g01462 378 MobiDBLite consensus disorder prediction 188 206 - -
Accr8g01462 378 MobiDBLite consensus disorder prediction 121 206 - -
Accr8g01462 378 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr8g01462 378 PANTHER GROWTH-REGULATING FACTOR 5 10 361 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01462 Accr-Chr8 35682821 35684223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01462 9 126 GRF Transcription Factor Family AT3G13960 70.339 1.37e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Accr8g01462 WRC 5.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01462 - - gmx:100783524 338.961