Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g01458 ATGGGAAGAAGCCCTTGTTGCTCCAAGGAGGGCTTGAACAGAGGAGCTTGGACTGCTCATGAAGACAAGATCCTCAAAGACTTCATCTCCGTCCACGGCGAAGGCCGCTGGCGCAGCCTCCCCAAAAGAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCCGACTCCGATGGCTCAACTATCTCAGACCCGACATCAAAAGAGGCAATATCACCCCTGACGAAGAAGAGCTTATCGTCCGCCTTCACAAGCTCTTGGGAAACAGATGGTCTTTGATTGCGGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAACACTAATTTAGGCAAGAAAGTGAAGAACCAGCATCATAATCGTCTTCATCATCAAAACAACAATGTTACTTCCTCTGCTCAACCTAAGACCGACAAAGCTTTCAAGAATAATGATAACAATCCAGTGAATCTCAAACCAGAATCAATCTCCCTGCCTTCTCCACATTCTCTCTTCAATGTCGTCCGTACAAAAGCCACCAAGTGCTCAAAGGTCGTCATCACCCCACGTCCTCCTCCTCCTCCTCCTTCCAGACTACTCTTGCAGATTACCGACACTGAAACAGAGCTGCTTCATCATCCCATGGAAGATGTTGCCACGGCGGCTGACTATAACCAGACGACGGGTTTACTCGGTGGCGCCGATGATAAGAGCTCGTCGAGGTTGTTGGTTGTGGAGAAGGATCGTCATCATCATTATCAGGAGCCATCGTCGTCGATGATTGCGGCGGATTTCAGCGTGGGAGAGATCTGCTTGTCGGACCTTCTGAACTCGGATTTCTCAGGAATGTGCGACTTCAGTAACAACAACAGCGTCGACGGCCTGTCACCGTCGTCGGACCAGCAACCCTTCGTGTTCTCCGATGATATTCTAAACGATTGGATGCAGAGCAACAACGGGGAAGACACAAATGTGGGCAATAATCTTCACTCTTTCACATCCTTTCTTGAATCCAGTGAGACATGGCTGGCAGAGTAA 1023 0.4907 MGRSPCCSKEGLNRGAWTAHEDKILKDFISVHGEGRWRSLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKNQHHNRLHHQNNNVTSSAQPKTDKAFKNNDNNPVNLKPESISLPSPHSLFNVVRTKATKCSKVVITPRPPPPPPSRLLLQITDTETELLHHPMEDVATAADYNQTTGLLGGADDKSSSRLLVVEKDRHHHYQEPSSSMIAADFSVGEICLSDLLNSDFSGMCDFSNNNSVDGLSPSSDQQPFVFSDDILNDWMQSNNGEDTNVGNNLHSFTSFLESSETWLAE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g01458 340 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 147 - -
Accr8g01458 340 FunFam MYB-related transcription factor 13 66 - -
Accr8g01458 340 FunFam Transcription factor TT2 70 152 - -
Accr8g01458 340 CDD SANT 16 61 IPR001005 -
Accr8g01458 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr8g01458 340 Gene3D - 14 66 - -
Accr8g01458 340 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr8g01458 340 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr8g01458 340 SMART sant 66 114 IPR001005 -
Accr8g01458 340 SMART sant 13 63 IPR001005 -
Accr8g01458 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr8g01458 340 MobiDBLite consensus disorder prediction 125 159 - -
Accr8g01458 340 MobiDBLite consensus disorder prediction 119 159 - -
Accr8g01458 340 CDD SANT 71 112 IPR001005 -
Accr8g01458 340 Gene3D - 71 145 - -
Accr8g01458 340 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr8g01458 340 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr8g01458 340 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g01458 Accr-Chr8 35648857 35650068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g01458 1 176 MYB Transcription Factor Family AT4G38620 52.151 3.31e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g01458 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g01458 K09422 - gmx:100781908 339.732